Gene CA2559_01125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCA2559_01125 
Symbol 
ID9295708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCroceibacter atlanticus HTCC2559 
KingdomBacteria 
Replicon accessionNC_014230 
Strand
Start bp278470 
End bp279729 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content36% 
IMG OID 
ProductABC transporter, permease protein, putative 
Protein accessionYP_003714991 
Protein GI298206812 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAGCA AAGACCGTTG GGATGAAATT ATAGAAGCCT TAAGCAGTAA TTGGTTTAGA 
ACCATACTTA CAGCCTTTGG AGTACTTTGG GGTATTTTTA TATTGGTTGT ATTGCTGGCA
GCAGGTAAAG GTCTGGAAAA TGGAGTAAAA TCAGATTTTG GAGGCATTGC TACTAACACC
ATGTTTATGT GGACCCAAGG TATTAGCAAA CCTTATAAAG GTTTACCTAA AGGCAGACAG
TTTAATTATA AAACAGACGA TGTTCAAGCA ATTAGAGATA ATGTACCTAA CCTAAGATTT
ATTTCTCCTA GAAATCAATT AGGAGGTTTT GGGGGTACAA ACAATGTGGT AAGAGGATTA
AAAACAGGAG CCTTTAATGT GTATGGAGAT TATCCAGAAA TCATTCAACA GGAGCCAATG
GATATTACCA GTGGTCGTTT TATAAACTAT GGAGATATAG AGGAAAAGCG TAAAGTAGCT
ATAATTGGCG AAGGCGTAAA AACAGCAATG TATGGGTTTG CGGAAGATCC CTTAGGAACA
TACATAAAGA TTAATGGTGT AAACTTTATG GTTATAGGTA CCTATAAAAA GAAAGGCGGA
AATGGTGATG CAGAAGAAGA ACAGAAACAA ATTTATGTGC CGTTTACTAC GTTTTCTCAA
GCATTTAATA GAGGAAACAA TGTAGGTTGG ATGGCCATAA CTGCAGAAGA TGGCTCATCT
ATCACAGAAA TAAAACCTCA AATATTCGAG CTTTTAAAAG AACGACATAC TATACATCCA
GAAGATGACA GAGCTATAGG AAACTTTGAT CTTTATGAGC AGTTTAGTAA AGTTAATGGG
TTGTTTATAG CCTTGCGCTT TGTCGCTTAT TTTGTGGGAA TACTAGTATT ATTATCAGGT
ATTATAGGTA TAAGTAACAT TATGCTAATT GTAGTAAAAG AACGCACAAA AGAGATTGGT
GTAAGAAGAG CTTTGGGAGC TACACCTTGG AATATAAGAG GTCAAATACT TATGGAGTCT
ATTGTGCTAA CTATAATTTC AGGAATGTTG GGAATTGCTT TTGCAACATT AGTAATTTAT
GGTGCTAACC AAATGTTGGA GGCAAATGGA CCTGTAGACA TGTTTGCAAA TCCGTCTGTA
AACCTAACAG TAGTATTAAT AGCATTAACC ATACTTGTAG TTTCTGGACT ATTAGCAGGA
CTCATACCAG CTCAAAACGC CATTAAAATT AAACCAGTAG ACGCATTGCG TACAGAATAA
 
Protein sequence
MFSKDRWDEI IEALSSNWFR TILTAFGVLW GIFILVVLLA AGKGLENGVK SDFGGIATNT 
MFMWTQGISK PYKGLPKGRQ FNYKTDDVQA IRDNVPNLRF ISPRNQLGGF GGTNNVVRGL
KTGAFNVYGD YPEIIQQEPM DITSGRFINY GDIEEKRKVA IIGEGVKTAM YGFAEDPLGT
YIKINGVNFM VIGTYKKKGG NGDAEEEQKQ IYVPFTTFSQ AFNRGNNVGW MAITAEDGSS
ITEIKPQIFE LLKERHTIHP EDDRAIGNFD LYEQFSKVNG LFIALRFVAY FVGILVLLSG
IIGISNIMLI VVKERTKEIG VRRALGATPW NIRGQILMES IVLTIISGML GIAFATLVIY
GANQMLEANG PVDMFANPSV NLTVVLIALT ILVVSGLLAG LIPAQNAIKI KPVDALRTE