Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CA2559_00260 |
Symbol | |
ID | 9295533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Croceibacter atlanticus HTCC2559 |
Kingdom | Bacteria |
Replicon accession | NC_014230 |
Strand | + |
Start bp | 83661 |
End bp | 85886 |
Gene Length | 2226 bp |
Protein Length | 741 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | |
Product | putative copper transport-related membrane protein |
Protein accession | YP_003714822 |
Protein GI | 298206643 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.348825 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAACAA CAAATCAAAA TACAGTTACG CAGACTTTCC CTGTTTTGGG AATGACCTGT GCTTCTTGTG CGAGTAGTGC AGAAAGTATC GTAACACATC AAGAGGGAGT GGTGAGTGCT TCTGTAAATT ATGCTACAGG AAATCTTATC GTTGAATTTC TATCCAACGT AACCAATGCC GAAAAGATAC GAAAAGCGGT CCAAGGTGTA GGATATGATT TATTAATTGA AGACGAATCC AAACAGCAGG AAAGCCTTGA GGTCATCCAC GAAAAGAAGT TTAAACAACT CAAAAATAAA ACCTTATGGG CGGTCATTCT TTCTTTGCCA GTAGTTATAA TAGGTATGTT CTTTATGGAT ATGCCTTACG GTAATGAAAT TATGTGGGCA TTTTCAACAC CTGTTGTATT GTGGTTGGGA AGAGATTTTT TTATAAATGC GTGGAAACAA GCCAAACACC GCAAAGCCAA TATGGATACC TTAGTAGCAT TGAGTACAGG CATTGCATAT ATTTTTAGTG TGTTCAATAT GTTGTTTGCA GGTTTTTGGC ATCAAAGAGG ATTACACGCT CACGTTTATT TTGAAGCCGC AGCCGTCATT ATCGCCTTTA TATTGTTGGG AAAATTATTG GAAGAAAAAG CCAAAGGCAA TACATCTTCT GCCATTAAAA AACTGATGGG CTTACAACCA AAAACGGTTA TTGTCATTCA AGCAGACAAC ACAGAAAAAC AGACAGCTAT TGAAAATGTA AAAGTTGATG ATGTCATTTT AGTAAAACCC GGTGAAAAAA TTGCTGTGGA TGGAATGGTC ATTTCGGGCA GTTCGTATGT GGACGAAAGT ATGTTGAGCG GAGAGCCTGT TCCCATATTA AAAAAGGAAA ACGAAAAAGT ATTTGCAGGA ACGATAAACC AAAAAGGTGG TTTCCAATTT AAAGCTGTAA AAGTCGGTAA GGAAACAATG CTTGCCCAAA TCATCAAAAT GGTGCAAGAT GCACAAGGGA GCAAAGCACC AGTTCAAAAA TTGGTGGATA AAGTAGCAGG AATTTTTGTG CCTGTGGTAA TGGGCATTGC ATTACTTTCC TTCATTGTTT GGATGATTTT TGGAGGGGAT AATGCCATAG TTCAAGGATT ATTAGCAGCC GTTACAGTCT TGGTAATTGC TTGTCCGTGT GCTTTGGGAT TGGCTACACC AACAGCCATA ATGGTAGGCG TTGGCAAAGG TGCGGAGCAA GGTACTTTAA TTAAAGATGC TGAAAGTTTG GAGTTAGCCA AAAAGGTTAA TGCCATCATT TTAGACAAAA CAGGAACAAT TACAGAAGGT CGTCCACAAG TTACAGGCAT TCAATGGTTG AATAATGATG ACAGCAAAAA ATACATTTTA TTCAGTATAG AAAAACAATC CGAACATCCA TTGGCGGAAG CCGTAGTGAA ATATTTAGAT AAAGTGAACT CAACTTCTCT TACTAATTTC GACAGCATCA CAGGAAAAGG TGCAAAAGCC GACCAGAATA ACGAAACCTA TTTTGTAGGA AACAAAAAGT TATTGTTTGA AAACAACATC AGTATTCCCG AAGAATTGCA ACAGCAAGCA AATGAATGGA GTAAGTTATC CAAAACCGTT ATTTGGTTTT CCGACAGTAA ACAAGCCCTT TCGGTAATTG CTATTTCCGA TAAAATAAAA AAAACATCTG CACAGGCGAT TAAAGAAATG CAGGATATGG GCATTGATTT GTATATGCTC ACAGGCGATA ACGAAGCCAC AGCAAGAGCC ATTGCCGAGC AAACAGGCAT TAAACATTAC AAAGCCGAAG TATTGCCACA GCACAAAGCC GATTTTGTAA AAGAACTGCA AGAGGAAGGC AAAACAGTAG CAATGGTTGG TGACGGCATT AATGACAGTA CAGCTTTGGC AACTGCAGAT GTAAGTATCG CTATGGGCAA AGGTTCAGAC ATTGCAATGG ACGTAGCTAA AATGACCATC ATTTCATCCG ACTTAACCAA AATACCACAA GCCGTCAAAC TATCCAAGCA AACGGTGGCA ACTATTAAAC AAAACTTGTT TTGGGCATTT ATTTATAACC TGATTGGTAT TCCGATTGCA GCAGGAATTT TATACCCAAT TAATGGTTTT TTACTCAATC CAATGATTGC AGGAGCAGCT ATGGCAATGA GTAGCGTAAG TGTTGTAAGT AATAGTTTGC GATTGAAATG GAAAAAAGTA ATATAG
|
Protein sequence | MATTNQNTVT QTFPVLGMTC ASCASSAESI VTHQEGVVSA SVNYATGNLI VEFLSNVTNA EKIRKAVQGV GYDLLIEDES KQQESLEVIH EKKFKQLKNK TLWAVILSLP VVIIGMFFMD MPYGNEIMWA FSTPVVLWLG RDFFINAWKQ AKHRKANMDT LVALSTGIAY IFSVFNMLFA GFWHQRGLHA HVYFEAAAVI IAFILLGKLL EEKAKGNTSS AIKKLMGLQP KTVIVIQADN TEKQTAIENV KVDDVILVKP GEKIAVDGMV ISGSSYVDES MLSGEPVPIL KKENEKVFAG TINQKGGFQF KAVKVGKETM LAQIIKMVQD AQGSKAPVQK LVDKVAGIFV PVVMGIALLS FIVWMIFGGD NAIVQGLLAA VTVLVIACPC ALGLATPTAI MVGVGKGAEQ GTLIKDAESL ELAKKVNAII LDKTGTITEG RPQVTGIQWL NNDDSKKYIL FSIEKQSEHP LAEAVVKYLD KVNSTSLTNF DSITGKGAKA DQNNETYFVG NKKLLFENNI SIPEELQQQA NEWSKLSKTV IWFSDSKQAL SVIAISDKIK KTSAQAIKEM QDMGIDLYML TGDNEATARA IAEQTGIKHY KAEVLPQHKA DFVKELQEEG KTVAMVGDGI NDSTALATAD VSIAMGKGSD IAMDVAKMTI ISSDLTKIPQ AVKLSKQTVA TIKQNLFWAF IYNLIGIPIA AGILYPINGF LLNPMIAGAA MAMSSVSVVS NSLRLKWKKV I
|
| |