| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CA2559_00025 |
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| Symbol | |
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| ID | 9295481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Croceibacter atlanticus HTCC2559 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014230 |
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| Strand | - |
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| Start bp | 32692 |
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| End bp | 36504 |
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| Gene Length | 3813 bp |
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| Protein Length | 1270 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | |
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| Product | DNA-directed RNA polymerase beta subunit |
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| Protein accession | YP_003714775 |
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| Protein GI | 298206596 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGCAA CGCAGACTGA AAGATTGAAT TTCTCAAATG TGAAGAATAG ACCTGATTAT
CCAGATTTCT TGGATATTCA AATACAGTCT TTCCAAGACT TCTTCCAATT GGAAACAAAA
TCTGATGAGC GGGAAGCAGA AGGTCTTTAC AAGACCTTTA TGGAAAACTT CCCTATTACG
GATACCCGTA ATCAATTTGT ATTAGAGTTT TTAGATTATT TCGTGGACCC GCCAAGATAT
TCTATTCAAG AATGTATTGA ACGCGGTTTA ACATACAGTG TACCACTTAA GGCAAGACTT
AAGTTGTATT GTACAGATCC AGAACACGAA GATTTTGAAA CCATCGTACA GGACGTGTAC
CTTGGTACTA TTCCTTATAT GACACCAAGT GGTACTTTTT GTATCAATGG TGCAGAACGT
GTTGTTGTTT CTCAATTACA CCGTTCTCCT GGTGTATTCT TTGGACAATC TTTCCACGCC
AATGGAACTA AATTATACTC TGCAAGAGTA ATTCCTTTTA AAGGATCTTG GATAGAGTTT
GCTACAGATA TAAACAGCGT AATGTATGCT TATATCGATA GAAAGAAAAA ATTACCTGTA
ACAACACTTT TCCGTGCAAT AGGTTTCGAA AGAGATAAAG ATATTCTTGA AATATTTGAC
CTAGCTGAAG AAGTAAAAGT TACTAAATCT GGTCTTAAAA AAGTACTTGG CCGTAAATTG
GCTGCACGTG TTTTAAATAC GTGGTATGAA GATTTCGTAG ATGAAGATAC TGGTGAAGTT
GTTTCAATTG AAAGAAACGA AATTGTATTA GACCGTGATA CAGAATTAGA AAAAGAGCAC
ATAGAAGAAA TTCTTGAGAC TGGTACTAAA ACTATTCTTT TACATAAAGA AGACAATAGT
ACTGGTGATT ATGCAATTAT TCATAATACA CTACAAAAAG ATCCAACAAA CTCTGAAAAA
GAAGCTGTTG AGCATATCTA TCGTCAATTA CGTAATGCAG AGCCGCCAGA TGAGGAAACT
GCACGTGGTA TTATAGATAA GCTATTCTTT AGTGACCAAC GCTACAACTT AGGTGAGGTA
GGTCGTTATA GAATGAACAA AAAACTTGGT TTAGATATCG CTATGGATAA GCAAGTGCTT
ACCAAAGAGG ATATTATTAC AATCATAAAA TATTTAATTG AGTTAATTAA CTCAAAAGCT
GAGATTGATG ATATTGATCA CTTATCTAAC CGTCGTGTAC GTACAGTAGG TGAGCAATTA
TCACAACAAT TTGGTGTTGG TCTTGCACGT ATGGCTCGTA CTATTCGTGA GCGTATGAAC
GTTCGTGATA ACGAGGTCTT TACTCCTATA GATTTGATTA ATGCAAAGAC TTTATCGTCT
GTAATTAATT CTTTCTTTGG TACAAACCAA CTTTCTCAAT TTATGGATCA AACCAATCCA
CTAGCAGAGA TAACGCACAA GCGTCGTCTT TCAGCTCTTG GACCTGGTGG TCTTTCTCGT
GAGCGTGCAG GTTTCGAAGT TCGAGATGTA CACTACACAC ACTATGGAAG ACTTTGTCCT
ATTGAAACAC CAGAAGGACC TAACATTGGT CTTATTTCTT CTTTGTCTGT ATATGCTAAA
GTAAATGCTT TAGGATTTAT TGAAACGCCA TACAGAAAAG TAGATGATGG TAAAATTAAT
TTAGATGAAT CACCAATTTA CCTTTCTGCA GAAGAAGAGG AAGGAATGAA AATTGCACAA
GCAAACATTC CATTAGACGA TAAAGGTAAT ATTGAGGCAG AACGTGTAAT TGCTCGTCTT
GAAGGAGATT TCCCAGTGGA AGATCCTAAG AACGTAAATT ATATAGATGT TGCTCCAAAC
CAGATATCAT CTATTTCTGC ATCTCTTATT CCGTTCCTAG AACATGATGA TGCAAACCGT
GCCTTGATGG GATCTAACAT GATGCGTCAA GCAGTACCAT TATTAAGAGT AGATTCTCCA
ATTGTAGGTA CAGGTCTTGA GCGTCAGGTA GCATCAGATT CTAGAGTGCT TATTAATGCA
GAAGGTGCAG GTACTGTAGA GTATGTTGAT GCTAATATGG TAACTATTAA GTATGATAGA
TCAGAAGAAG AACGTCAAGT TAGTTTTGAT AGTGATTCAA AATCTTACAA CTTAATTAAA
TTCCGTAAAA CTAACCAAGG TACATCTATC AACCTTAAGC CAATTGTAAA AGTTGGTGAC
CGTGTTGAAA GAGGACAAGT ACTTTGTCAA GGATATGCAA CAGAAGCTGG AGAACTTGCT
TTAGGTAGAA ATATGAAAGT AGCCTTTATG CCTTGGAAAG GGTATAACTT TGAGGATGCA
ATTGTAATTT CAGAAAAAGT AGTACGTGAA GATATATTTA CATCTATTCA CGTAGATGAA
TATTCTTTAG ATGTTAGAGA TACAAAATTA GGTAATGAAG AATTAACTAA TGACATACCA
AACGTTTCAG AAGAGGCTAC TAAAGACCTT GATGAATATG GTATGATTCG TATTGGTGCA
GAGGTTAAGC CTGGAGATAT ATTAATTGGA AAAATTACTC CAAAAGGAGA AAGTGATCCA
ACTCCAGAAG AAAAATTACT TCGCGCAATA TTTGGTGATA AAGCAGGAGA TGTAAAAGAT
GCATCTTTAA AAGCATCGCC ATCTCTTAAC GGTGTTGTAA TAGATAAGAA ATTGTTTGAA
AGAGCAATTA AAGATAAGCG TAAGAGAGCA CAAGATAAAG AAGATATAGC AAGACTTGAA
GTTGAGTATG ACGCTAAATT TGATGACCTT AAAGCTGTTT TAGTTGAAAA GTTATTTAAC
CTAATAGGTG GAAAAACAGC ACAAGGTGTT AAGAATGATT TAGGGGAAGA CATTTTACCA
AAAGGTAAGA AGTATACTTT AAAAATGCTT AACTCTGTTG AAGATTATAC TCACCTTACT
CAAGGTACGT GGACTACAGA TGATGAGTTA AATAGTATGG TTGCAGACTT AATCCATAAT
TATAAGATTA AGGAAAACGA CTTACAAGGT AACTTAAGAC GTGAGAAATT TACTATTTCT
GTAGGAGATG AGTTGCCAGC AGGTATTATC AAGTTAGCAA AAATTTATAT TGCTAAAAAG
CGTAAGCTTA AGGTTGGTGA TAAAATGGCA GGTCGTCACG GTAACAAAGG TATTGTAGCA
CGTATTGTAC GTGAAGAAGA TATGCCTTTC TTAGAAGACG GAACGCCAGT AGATATCGTA
CTTAACCCAC TTGGTGTACC ATCTCGTATG AACATCGGGC AAATTTACGA AACAGTTCTT
GGTTGGGCAG GACAAAAATT AGGACGCAAG TTTGCTACTC CAATTTTTGA CGGTGCAACT
TTAGACCAAA TAAATGAATT AACAGACGAA GCAGGTATTC CTCGTTTTGG CCATACACAT
TTATATGATG GTGGTACAGG AGACCGTTTT GATCAACCAG CAACAGTAGG TGTTATCTAT
ATGTTGAAGT TAGGTCACAT GGTAGATGAT AAGATGCACG CTCGTTCTAT AGGTCCTTAC
TCATTAATTA CACAACAACC ATTAGGTGGT AAAGCACAAT TTGGTGGTCA GCGTTTTGGT
GAGATGGAGG TTTGGGCTCT TGAAGCATAT GGTGCATCTA GCACTCTTCG TGAGATCCTT
ACAGTAAAAT CTGATGATGT TATTGGTAGA GCAAAAACTT ACGAAAGTAT AGTAAAAGGT
GAGCCAATGC CAGAACCAGG ATTGCGAGAA TCTTTTAACG TGTTAATGCA CGAATTAAAA
GGATTAGGAC TTGATATTCG ACTCGAAGAA TAA
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| Protein sequence | MLATQTERLN FSNVKNRPDY PDFLDIQIQS FQDFFQLETK SDEREAEGLY KTFMENFPIT
DTRNQFVLEF LDYFVDPPRY SIQECIERGL TYSVPLKARL KLYCTDPEHE DFETIVQDVY
LGTIPYMTPS GTFCINGAER VVVSQLHRSP GVFFGQSFHA NGTKLYSARV IPFKGSWIEF
ATDINSVMYA YIDRKKKLPV TTLFRAIGFE RDKDILEIFD LAEEVKVTKS GLKKVLGRKL
AARVLNTWYE DFVDEDTGEV VSIERNEIVL DRDTELEKEH IEEILETGTK TILLHKEDNS
TGDYAIIHNT LQKDPTNSEK EAVEHIYRQL RNAEPPDEET ARGIIDKLFF SDQRYNLGEV
GRYRMNKKLG LDIAMDKQVL TKEDIITIIK YLIELINSKA EIDDIDHLSN RRVRTVGEQL
SQQFGVGLAR MARTIRERMN VRDNEVFTPI DLINAKTLSS VINSFFGTNQ LSQFMDQTNP
LAEITHKRRL SALGPGGLSR ERAGFEVRDV HYTHYGRLCP IETPEGPNIG LISSLSVYAK
VNALGFIETP YRKVDDGKIN LDESPIYLSA EEEEGMKIAQ ANIPLDDKGN IEAERVIARL
EGDFPVEDPK NVNYIDVAPN QISSISASLI PFLEHDDANR ALMGSNMMRQ AVPLLRVDSP
IVGTGLERQV ASDSRVLINA EGAGTVEYVD ANMVTIKYDR SEEERQVSFD SDSKSYNLIK
FRKTNQGTSI NLKPIVKVGD RVERGQVLCQ GYATEAGELA LGRNMKVAFM PWKGYNFEDA
IVISEKVVRE DIFTSIHVDE YSLDVRDTKL GNEELTNDIP NVSEEATKDL DEYGMIRIGA
EVKPGDILIG KITPKGESDP TPEEKLLRAI FGDKAGDVKD ASLKASPSLN GVVIDKKLFE
RAIKDKRKRA QDKEDIARLE VEYDAKFDDL KAVLVEKLFN LIGGKTAQGV KNDLGEDILP
KGKKYTLKML NSVEDYTHLT QGTWTTDDEL NSMVADLIHN YKIKENDLQG NLRREKFTIS
VGDELPAGII KLAKIYIAKK RKLKVGDKMA GRHGNKGIVA RIVREEDMPF LEDGTPVDIV
LNPLGVPSRM NIGQIYETVL GWAGQKLGRK FATPIFDGAT LDQINELTDE AGIPRFGHTH
LYDGGTGDRF DQPATVGVIY MLKLGHMVDD KMHARSIGPY SLITQQPLGG KAQFGGQRFG
EMEVWALEAY GASSTLREIL TVKSDDVIGR AKTYESIVKG EPMPEPGLRE SFNVLMHELK
GLGLDIRLEE
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