| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mesil_3240 |
|---|
| Symbol | |
|---|
| ID | 9252770 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus silvanus DSM 9946 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014213 |
|---|
| Strand | + |
|---|
| Start bp | 41421 |
|---|
| End bp | 42347 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003686565 |
|---|
| Protein GI | 297567594 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.367926 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCTTC TCGAGGTTCA AGGGCTTTCC GTAGCATTCC AACACGAGGA GGTACTACGC
GAGGTGGACC TCAACCTCGA GGCCGGGGAG ACCGTGGCTC TCATCGGGGA GTCTGGAGGG
GGGAAGTCAG TTTTGATCGA AACCCTCCTC CATCTCCTGC CTCCGAGGAG CCAGGTGAAG
GGAAGGGCCT TTTTCCGCGG GGAGGATCTT CTGGCTCTTT CCTCTCACGC TCACAGGGCC
CTCCTGGGAC AGCACATAGC CTGGATACCC CAGGCCACCA CAGAAGCTCT CCACCCCATG
TTGCTAGTCG GGTTTCAGCT GGCTGAGCCT CTATTGTTAA GAGGGGTTCC TCGACGAGAG
GCTTATGCCC GTCTCGCCAA ACTTTTTGCG GCCTTAGATC TACCCCTGGA AACCCTCCAC
CGCTATCCCC ATCAGCTCTC CGGGGGCATG CGGCAGCGGG CCCTGGTGGC CGGAGCCCTG
CTCACCGGGG CTGGGCTGGT TTTGGCCGAC GAGCCTACCA AAGGGATAGA TGCCCTGCGG
AAAAGACAGG TCGTCACCCT CTTCCAAAAG GCCCAGGAGC TAAATCCGGA GATGGCCCTT
CTCCTCGTGA CCCACGATCT TCCCCTAGCT CAGGCCCTAG CTGACCGGGT AGCGGTGCTC
TTTGCCGGGC GGGTAGTAGA GGTAAGCAGA GCCCAAAGCT TCTTTCAAGC CCCTGCGCAC
CCTTATGCCA AGGCCCTTCT CGAGGCTCTA CCCGAACGGG GACTCAAGCC CCTTCAGCTA
GGCCTGGGCC GGGAGGTGGA GAAGGGATGC CCCTTTGCCC CTTCGTGCCC GGAAAACTTC
AGTCCCTGCA GAGAGCGGGA ACCCCCTCTA CTGCCGCTTC CCCAGGGTAG CGTGAGGTGC
TGGCGGTATG GAGATCCAAG CCTTTGA
|
|---|
| Protein sequence | MPLLEVQGLS VAFQHEEVLR EVDLNLEAGE TVALIGESGG GKSVLIETLL HLLPPRSQVK
GRAFFRGEDL LALSSHAHRA LLGQHIAWIP QATTEALHPM LLVGFQLAEP LLLRGVPRRE
AYARLAKLFA ALDLPLETLH RYPHQLSGGM RQRALVAGAL LTGAGLVLAD EPTKGIDALR
KRQVVTLFQK AQELNPEMAL LLVTHDLPLA QALADRVAVL FAGRVVEVSR AQSFFQAPAH
PYAKALLEAL PERGLKPLQL GLGREVEKGC PFAPSCPENF SPCREREPPL LPLPQGSVRC
WRYGDPSL
|
|---|
| |