Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mesil_3204 |
Symbol | |
ID | 9252734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus silvanus DSM 9946 |
Kingdom | Bacteria |
Replicon accession | NC_014213 |
Strand | + |
Start bp | 4859 |
End bp | 5527 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | autotransporter-associated beta strand repeat protein |
Protein accession | YP_003686534 |
Protein GI | 297567563 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000564302 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCCTGA GCCTGCCCAT CGCCTTCCTC GCGGGGTTGC TTTCGTTTCT ATCGCCCTGT GTCTTGCCGC TGGTGCCTAC CTATTTGCTC TACCTGGGGG GCGAGCGGGG TCGCCCGCTT GTCAACGCCG GTTTTTTCGT GATGGGCTTC TCGGCGGTCT TCCTCGCGCT GGGACTCCCC TTCACCCTGT TGGGAAGCCT GCTGTTTGAC TACCGCGAGG TGCTGAGCCG GGTAGGAGGG GGGTTCATGG TCCTGCTGGG GGCCTACATG CTGGGCCTCA GGCCGCGCTG GGGGGTAAGC CTCCGCTATG GCGGTGACAC CACCCGTCCT TGGGGGGCCT TTGTCCTCGG AACCGTGCTG GGGCTGGGCT GGACCCCCTG TATCGGCCCA GTGCTGGGCG GCATCCTCAC CCTTACGGCC GCGGGTGGAG GGGTAGGGCT GCTCCTGGCC TACATCCTGG GGCTGGCGCT GCCGTTCCTC CTGGTGGCTG CCTTCACCGA CCGGATGCGG CCCTGGCTGC GCCGTATGGC CCGCTTCTCG CACGGGGCGG AACTCGCGGC AGGGGCCGTG CTGGTGGTGG TGGGCTTGCT GCTGCTCACC GGAACCTATT CCGTTCTCAA TAGCTTCTTT CTCAAAATCA CCCCGGACTG GCTGCAAGAC CGGCTCTAG
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Protein sequence | MTLSLPIAFL AGLLSFLSPC VLPLVPTYLL YLGGERGRPL VNAGFFVMGF SAVFLALGLP FTLLGSLLFD YREVLSRVGG GFMVLLGAYM LGLRPRWGVS LRYGGDTTRP WGAFVLGTVL GLGWTPCIGP VLGGILTLTA AGGGVGLLLA YILGLALPFL LVAAFTDRMR PWLRRMARFS HGAELAAGAV LVVVGLLLLT GTYSVLNSFF LKITPDWLQD RL
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