| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mesil_R0028 |
|---|
| Symbol | |
|---|
| ID | 9251070 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus silvanus DSM 9946 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014212 |
|---|
| Strand | - |
|---|
| Start bp | 1564420 |
|---|
| End bp | 1565556 |
|---|
| Gene Length | 1137 bp |
|---|
| Protein Length | 378 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | spermidine/putrescine ABC transporter ATPase subunit |
|---|
| Protein accession | YP_003684967 |
|---|
| Protein GI | 297565995 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0855838 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAACAAG CCCTATTTCG GGGACGCCGA GAGCGGAGAC TGGCTGACGG GATTGCGGTT
CGCCTCGAGG GCGTTCGCAA GCGCTTCGGC GATACCGTGG CGGTAGCGGG AGTAGATCTG
GAGATTAAGA GCGGGGAGTT CTTCAGCCTG CTAGGGCCTT CGGGCTGCGG CAAGACCACC
CTGCTTAGGA TGATCGCTGG CTTCGACACA CCCGACGAGG GGCGCATTCT GATCGCAGGC
CAGGACATGC GGGGAGTTCC TCCCTATCGC CGCCCGGTCA ACACGGTGTT TCAGAACTAT
GCCCTGTTTC CCCACCTCAC CGTCGAGCAA AATATCGCCT TTGGACTCAG GATGAAGCGA
ATGCCCAAGG ACCAGATCGC CAAGCGGGTG GGTTGGGCGC TCGAGCTGGT GAACATGCAG
GGGCTCGAGA CCCGCCGTCC CCACCAACTC TCCGGCGGAC AGAAGCAGCG GGTCGCGTTG
GCGAGAGCCT TGGTCAATGA ACCGGAGGTG CTTTTGCTGG ACGAACCGCT CTCCGCGCTC
GACCTCAAGC TGCGGCAGGA GCTGCGGGTA GAGCTGATGA ACCTGCAGGA GCAGCTCGGC
ATCACCTTTA TCTTCGTCAC CCACGACCAG GAAGAAGCTT TGGTGATGTC TGACCGGATC
GCAGTGATGA ACCGGGGCAA GGTAGAGCAG GTAGGCCCCG CCGAAGAAGT CTATGAGCTG
CCCAAAACCC CATTTGTGGC GAAGTTTTTG GGCGACTCCA ACCTGATCCC CGCCACCGCG
CTCGAGCCCC GCCGGGTCCG CACCCCGCTA GGCGAGTTCG TGCTGGACGA GGAGGACGCC
CTTACGCCAG GGCAGGAGGT GTTGCTTTCG ATCCGGCCCG AAAAGATCCG CCTCTTTCGC
GAACGCCCCC AGCTTCCCAA CGTCTTCCAA GCCCAGGTGG ACGACATCAT CTATACCGGC
TCGGAGAACC AATACCTGCT CAAGGCCGGG GGGATGACCC TGGTGGTCGA CACCCTCAAC
CAGGACATCC TCGAGCCCGG CCACGATGAG TTCACCTACG ACGAAGTGGT CTGGGTGGCG
ATGACCCCGG AGAAACTAGT GGTGGTAGGG ACGGGCCAAA CGGAGGGAGA GCCGTGA
|
|---|
| Protein sequence | MEQALFRGRR ERRLADGIAV RLEGVRKRFG DTVAVAGVDL EIKSGEFFSL LGPSGCGKTT
LLRMIAGFDT PDEGRILIAG QDMRGVPPYR RPVNTVFQNY ALFPHLTVEQ NIAFGLRMKR
MPKDQIAKRV GWALELVNMQ GLETRRPHQL SGGQKQRVAL ARALVNEPEV LLLDEPLSAL
DLKLRQELRV ELMNLQEQLG ITFIFVTHDQ EEALVMSDRI AVMNRGKVEQ VGPAEEVYEL
PKTPFVAKFL GDSNLIPATA LEPRRVRTPL GEFVLDEEDA LTPGQEVLLS IRPEKIRLFR
ERPQLPNVFQ AQVDDIIYTG SENQYLLKAG GMTLVVDTLN QDILEPGHDE FTYDEVVWVA
MTPEKLVVVG TGQTEGEP
|
|---|
| |