| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mesil_3141 |
|---|
| Symbol | |
|---|
| ID | 9252667 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus silvanus DSM 9946 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014212 |
|---|
| Strand | + |
|---|
| Start bp | 3189834 |
|---|
| End bp | 3192119 |
|---|
| Gene Length | 2286 bp |
|---|
| Protein Length | 761 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | Glucan 1,4-alpha-glucosidase |
|---|
| Protein accession | YP_003686476 |
|---|
| Protein GI | 297567504 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.136567 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGCTT TTGGCGTGCC GGGCATCTCT CCTACCTGGG CCTCCAGCAG CAAGGACCTG
GTGGGCACGG CCCTGGGCAC GGCCCGGGTC TGGTTTACCC TGGGGCATGG CATCCTCAAC
GAGGTCTTCT GGCCTTCCAC CGGCAGGCCG CAGATCCGCG ACCTAGGCTT CATCGTGGCC
CGGGAGGGGG CCTGGTACGA GGTCAAGCGG GTGCACTCCT ACACCCTCTC GACCCCGGCC
CCCGAGGTGC CCCTGCCCCA GGTGGTGCAT CGGGGCGAGG AGTACACGCT GGAGCTGGAG
TGCCTGGTCG ACCCTAACCG CGATGTGGTG CTGGTGCGCT ACCGGCTGGA AGGGGAGGGC
TTCCGGCTGT ATCCGCTGCT GGCCCCCCAC CTGGGCGGCA GCGGTCACGA CAACACCGCC
TGGGTGGAAG GGTCGGCTCT CTATGCCCAG AAAGGGATGG CCGCGCTGGC ACTTCTCGCT
AAGCCGGGGT TTACCCGGGC CAGCGCGGGT TTTGTGGGCT TTTCCGATGG TTGGCAGGAT
TTTCAACGGA ACAGAGCCAT GACTTGGAGC TTCAGCCGGG CCACGGGAGG CAACGTGGCC
CTGATGGGGG AGCTGCTGGC CCCCGCGGGG GTGCTGGCCC TGGGGTTTGC CGAGACCCCG
GAGGGGGCGC ACACCCTGGC CGCCTCGAGC CTGACTGAAG ACTACGGGGC GGTACGGGAT
CGCTACTTGG AAGGTTGGCG GGCCTGGGCT AGGGGGCTCA AGATCGAGGG GGCGAGCCCG
GAACTCACCC GGATGGCCCG CACCTCGACC ATGGTGCTCC GGGTGCATGA GGACACCACT
TACCCCGGCG CGGTGGTGGC CAGCCTCTCC ACTCCCTGGG GTTCCTCCCA CGACGATCCT
GGGGGCTACC ACCTGGTCTG GCCGCGCGAC GCGGTGGAGG CTGGGCTGGC CCTGCTGGCC
GCGGGCCAGG TGCAAGACGC CCGGCGGATG TTGGCCTATC TGCTTGCCAC CCAACAGCCC
GACGGAAGCT GGCCGCAGAA CTTCTACCCC GATGGGCGGG CCTACTGGCA GGGTCTCCAG
CTCGACGAGG TTGCCCTGCC GGTGCTGCTG GCGGCGCGGC TGGAGGAAGA GGGAGGGCTA
GCCGAGCGGG CCCAGGTGCA GCGGATGGTG CAAAAGGCTC TCGGTTTTAT CGCGCAAAAC
GGTCCCTATA GCCCCCAGGA CCGCTGGGAG GAGAACGCCG GAGCCAACCC CTTCACTCTG
GGGGTACAGG TGGCCGCGCT GGTGGCGGGG GCAGCCTTTT TGGAGGAACC CGAGCGAAGT
TATGCCCTCT CGTTGGCCGA TGCCTGGAAC GCCCGGATCG AGGAGTGGAC GTTTGTGGAG
AATACCCCCC TTGACCATCA GCACGGGCTG CGGGGTCATT ACGTGCGCAT CCGACCCCCG
GGGACGATGG GCCTACGGGG CCGGGTGCTG GTGCAGAACC GCCAGGGTGA GCAGGTAGCG
GCTGAGGAGC TGGTGGGGCT GGAGTTTTTC TACCTGGTAC GGCTTGGGCT GCGCTCGCCG
CATGATCCCC GCGTCCGCGA TACCCTACGG CTGGTGGAGG CTCTACTGCG GGTGGATACC
CCCAGCGGTC CTTTTTACCA CCGCTACAAC CACGACGGCT ACGGCGAGCA TGCCGACGGC
CGCCCCTTTG ACGGGAACGG GGTGGGCCGG GCCTGGCCCC TCCTGAGCGG GGAGCGGGGC
CACTATGCCC TCCTGGCAGG GGAAGATCCC CTGCCCTACC TCTGGACCAT GGCCCGTGCG
GCCAGCCTGG GGGGCCTGAT CCCGGAGCAG GTCTGGGACA GCCCGCCGAT CCCCGAACGG
GGTCTATTCC CCGGGCGGCC CAGCGGCAGC GCGATGCCCC TGGTCTGGGC CCATGCCGAG
TACCTCAAGC TCTTCCTGGC ATGGCAACAG GGCCGTCCCA GCGAGTGGCT CCAGGGGGTA
GCTCAGCGCT ATCAAAGCCC CCGCCCTCCC CAAATCCTGC ACTGGCGCAG CGACACGCCC
CACCGGGTCG TCCGCCCCGG CCAAACCCTC CAGGTCGAGG CCACGCGGCC CTTCACCTTG
CACTTTGGTT TTGACGGCTG GCAAGAGGTA CAGGAGCTGC CTGCTACCGC GGTGGGCCTG
GGTTGTTTTG GGGTTCAGCT CGAGCCTGCG CTGCTGCAGG GCCACCGCTC GCTCGAGTTC
ACCCGGCGCT TCGAGGAGGG CTGGGAAAGG CGGGACTACA GGGTGGAGAT TCTGCAAGAG
GGGTGA
|
|---|
| Protein sequence | MEAFGVPGIS PTWASSSKDL VGTALGTARV WFTLGHGILN EVFWPSTGRP QIRDLGFIVA
REGAWYEVKR VHSYTLSTPA PEVPLPQVVH RGEEYTLELE CLVDPNRDVV LVRYRLEGEG
FRLYPLLAPH LGGSGHDNTA WVEGSALYAQ KGMAALALLA KPGFTRASAG FVGFSDGWQD
FQRNRAMTWS FSRATGGNVA LMGELLAPAG VLALGFAETP EGAHTLAASS LTEDYGAVRD
RYLEGWRAWA RGLKIEGASP ELTRMARTST MVLRVHEDTT YPGAVVASLS TPWGSSHDDP
GGYHLVWPRD AVEAGLALLA AGQVQDARRM LAYLLATQQP DGSWPQNFYP DGRAYWQGLQ
LDEVALPVLL AARLEEEGGL AERAQVQRMV QKALGFIAQN GPYSPQDRWE ENAGANPFTL
GVQVAALVAG AAFLEEPERS YALSLADAWN ARIEEWTFVE NTPLDHQHGL RGHYVRIRPP
GTMGLRGRVL VQNRQGEQVA AEELVGLEFF YLVRLGLRSP HDPRVRDTLR LVEALLRVDT
PSGPFYHRYN HDGYGEHADG RPFDGNGVGR AWPLLSGERG HYALLAGEDP LPYLWTMARA
ASLGGLIPEQ VWDSPPIPER GLFPGRPSGS AMPLVWAHAE YLKLFLAWQQ GRPSEWLQGV
AQRYQSPRPP QILHWRSDTP HRVVRPGQTL QVEATRPFTL HFGFDGWQEV QELPATAVGL
GCFGVQLEPA LLQGHRSLEF TRRFEEGWER RDYRVEILQE G
|
|---|
| |