| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mesil_2978 |
|---|
| Symbol | |
|---|
| ID | 9252501 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus silvanus DSM 9946 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014212 |
|---|
| Strand | + |
|---|
| Start bp | 3024919 |
|---|
| End bp | 3026817 |
|---|
| Gene Length | 1899 bp |
|---|
| Protein Length | 632 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | Tetratricopeptide TPR_4 |
|---|
| Protein accession | YP_003686324 |
|---|
| Protein GI | 297567352 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACAAAG GGGGGGTGGA CGTGTGGCTT TCCCAGCGCC TCGAGACCCT GCGCCAACAC
CCCGGACCGA TCATTTTGGA GGGCGATCCC GAGTGGGGGG CTGCATACCT GATTGCCGCC
TTAGCCGAGC GGCCTCTGGT CTGGCTAGAG CTCAACGCCC GCGACGCCAA AGACCCAGTG
GTGCAGGGCA ACAAGCTGGC CGAGGCCGTG GCGCGGGCGG TAGGAAGCCC ACTTTTCGGT
TACGCCCTGC CGTATAGCTA CGGGCTGTCG GTGCTGCAAC AGCATCTCGA GCTACTGGGG
CCGCTCACCT TCGCGCTCTC GGGGGCCGAG TACGGGGTCG GTCTGGCTCG CTCGCTGCTC
GGGCTCCACC GCTCGGGCAG CCGGGTGATC TTGCACTTTT CCCATCTCCC CCCTGGGTTC
CATCCCCCCG CCGGTAGTCT GCGGCTAGGA CCAGAGCAAC TCGCCCTCAC CCACGAGGAA
GCCGCCGCGC TGGGGGCTGG GGGGATGAGC CGGGATCGGC TCGAGACCCT CTTAACGACG
AGCGGGCGGG CTTACGAGCG CTTTTTGCTG CTGCTCGACG CCGAACGCGC TCTCCCCGGA
CCCCGCACTC GACCCAGCCC GCGCGGACCG CGCCCCCTAT TAGGCGAAGA GCCTGCCACA
ACCGAGGAAC AAGCCCAGGC GCTTTTCAAC GCCCTGGCCC GGCAGCGGCG CTGGATTGAG
GCGCTCGAGC TGGCCAGCGT CCGCCTTCCC CATCTGGTTC CCCAAGCGCT CGAGCCCGCC
GCTCAGACCA TGTGGGCTCG GGGAACCCTG GACCTATTAC ACCAACTGCT GCGCCGCCTC
CCCCCCGACC CTCGGGTGCT TCGCTGGCGG TTAGCCGCGG CGCTCGAGCA AGAGCAAGAG
GCGGAACTTT TACCTCAGGT CGAGGCAACG CTGCGCCAGG AGGAAGCGCC CGAGCTACGG
GCGCTATACG CCTTGGCTCT GTACTACCGA GGCGACCTGG AAGCATCGCT GCACCAGGCC
CGCCGGGCCG CCGAGGCCGC AGCCACCCCG CTGACGTTGC ACCACTGGGG ACGGCTCCGC
GGGGTTTTGG ACCCCGCCCA GGCCCTCCAT ACGTTAAAGG AGGCGCTGCG CCTGGCCGAG
TTGCAGCAAG ACCACTACCA CACCATCCTC TGCACCTTAT CCCTCGCCCA GACTTTCAAC
GCGCTAGGGC GCTACGAGGA AGCAGCGGAC TGGGCCGAAT GGGGGCTCAA CCTATACCAA
CACGAAGGGC TAGGGCACGG CGGCCTACGG CTTCACCTTT TGCTCGAGTG GACCGCAAGC
CGCACACTGC TGGGGCAAAC CGCGGGTCTT GGGGAGCGCT TAAAGCAGGA AAACCCCTCT
GGAAGCGCGA GCTCAAGGCT TGGCGCCCTT TTTCGCAGCA CCCTGGCCGA TTTTTACCTG
AGCGAGGGAC AGCCCGAGCA AGCCGAGCGA ATCTACGCCG AGCTGGCCCA GATCACCCAC
CGCCGGGAGG ACTACGCCGC TTTGGCTAAC CTCTGGGTGC GGGTGTTGCT GGAATGCGGA
CGGGAGGAGG AAGCGTTGCA GGTGGCCCGG CGGGCTTTGC GGCTTACCGA GGGGCTACCT
CCCTTTTTTC GCCGACGAGC CCAGCTCGCC TATGGGATGG CCCTGAGCCT GCGCGACCCT
ACCCAAGGAG TAGAGGCCTT GCAAGCGGTG CTGCCTGCGC TGCGCGAGCC GCTATTGGCC
CCTCGGCTGG CCCAGGCCGG GCTGTATCTG GCCCGCGCAC AGCTGGCTTT GGGCCAAACC
GCCGCCGCCA AGGCCACTGT GGAGTCCATC CGCAGCTTCG TAACCCCGGG GGGGCTGGGT
ATCTGGCCGG TCCCAGGGAA GCCTTCCGCC CGACCCTGA
|
|---|
| Protein sequence | MYKGGVDVWL SQRLETLRQH PGPIILEGDP EWGAAYLIAA LAERPLVWLE LNARDAKDPV
VQGNKLAEAV ARAVGSPLFG YALPYSYGLS VLQQHLELLG PLTFALSGAE YGVGLARSLL
GLHRSGSRVI LHFSHLPPGF HPPAGSLRLG PEQLALTHEE AAALGAGGMS RDRLETLLTT
SGRAYERFLL LLDAERALPG PRTRPSPRGP RPLLGEEPAT TEEQAQALFN ALARQRRWIE
ALELASVRLP HLVPQALEPA AQTMWARGTL DLLHQLLRRL PPDPRVLRWR LAAALEQEQE
AELLPQVEAT LRQEEAPELR ALYALALYYR GDLEASLHQA RRAAEAAATP LTLHHWGRLR
GVLDPAQALH TLKEALRLAE LQQDHYHTIL CTLSLAQTFN ALGRYEEAAD WAEWGLNLYQ
HEGLGHGGLR LHLLLEWTAS RTLLGQTAGL GERLKQENPS GSASSRLGAL FRSTLADFYL
SEGQPEQAER IYAELAQITH RREDYAALAN LWVRVLLECG REEEALQVAR RALRLTEGLP
PFFRRRAQLA YGMALSLRDP TQGVEALQAV LPALREPLLA PRLAQAGLYL ARAQLALGQT
AAAKATVESI RSFVTPGGLG IWPVPGKPSA RP
|
|---|
| |