| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mesil_2488 |
|---|
| Symbol | |
|---|
| ID | 9252004 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus silvanus DSM 9946 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014212 |
|---|
| Strand | - |
|---|
| Start bp | 2528316 |
|---|
| End bp | 2529635 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | transposase, IS605 OrfB family |
|---|
| Protein accession | YP_003685849 |
|---|
| Protein GI | 297566877 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.143837 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGTGCT ATACTGTTTT CGTACAGACC CTTACGCTCC GTTGTACCCT CAAGCCCACT
CCCGAACAGG CGGCGGCGCT GGCTGCTTCG CCGATAGGCG AACATCTTGC GGCCACGGTG
CGGTTGTTCG CCCAGGGCTG CAACCACGCC CTGAGGGTGG CTAAGGAGCG GGGAGAGTTC
CGTCGCTTCC AGCTGCATCA CCTGGTCTAC CGCGACCTCC GGGCGATGGG GCTCAGTGCT
AACCTCGCCG TACAAGCGAT TGCCCGCGTG GGCCGCAAGA AGGGCAGCCG GGCGAAGTTC
TACCAGCCCA CCTCCTGTAC CTTCGACCCG CGCACCCTCT CCCTGCGGGG GGAGTCGGTG
TCCTTGACCA CCACCGCAGG CCGCCTGGTC ATCCCGATGA AGCTGGGGAA CTACCAGCGG
GGGTTGTTGA AGCGGGCCAA GAGCGTCCAG GGAGGGGTGC TGACCCAGGG GCCGAAGGGC
AAGTGGTACC TCAACCTCAT TCTTCGGCTG GAAACCCCCA CCCCGCCCAC GGGTGGCGGG
AGGGTGGTGG GGGTGGACCT GGGGCAGAAG GTCCTGGCCA CCCTCTCCAG CGGGGTGCAG
TTTTCCGGCG GTTCCCTCAA GGGAAACCGT CTGCATTATC TGGCCAAGCG GGCTGAGGTC
CAATCCAAGC TGGACCGTCC TTCCGAACGC ACCAGGGGCA CTCGTCGCCT TTGGGAACGG
CTTACGGGAA GGGAAGCCCG TTTTGTGAAC CACACCCTGC ACACCCCGGC AAGGCGCATC
GTGGACGGTC TGGAACCCGG CGATACGCTG GCCATCGAGG ACCTGACCCA CCTCAGGAGC
CGCACCGCCA AGAGGGGTAA GAAGGAAAGG CACCTCCACA ACCTCTGGCC CTACGCCCGC
CTCCGCTCGC TGCTGGAGTA CAAGGCGGCC CTGAGGGGGG TACAGGTTGT TGCGGTGGAC
CCCAGGCACA CCAGCCAGGA ATGCCCCCGG TGTGGACATA CCGCCAAGGA GAACCGCAAA
AGCCAGGCGC TGTTCCGCTG CGCGGCGTGT GGGTTTCAGC ACAACGCGGA CTGGGTGGCC
GCGCATAACA TTGCCTTGCG TGCAGGGCCG CAGGCCCTCC CGCAGGGGAT CGTTGCCCGA
AGAGCAGGCT CGACGGGCAT GGGCCGCGAG GGGAGCGGCA TAGCCGCTGG GCGCTGTGCG
CCTAACCTGT GTAAACCGGC CCGGATTCTG AGGGTGTCGT CTTTGCATCG TTTCTCCTCA
GAAAGCCCCC GGCTTCAGCC GTGGGGTGGT TTACGCATTC ACTCTAACCA AACTCTGTGA
|
|---|
| Protein sequence | MMCYTVFVQT LTLRCTLKPT PEQAAALAAS PIGEHLAATV RLFAQGCNHA LRVAKERGEF
RRFQLHHLVY RDLRAMGLSA NLAVQAIARV GRKKGSRAKF YQPTSCTFDP RTLSLRGESV
SLTTTAGRLV IPMKLGNYQR GLLKRAKSVQ GGVLTQGPKG KWYLNLILRL ETPTPPTGGG
RVVGVDLGQK VLATLSSGVQ FSGGSLKGNR LHYLAKRAEV QSKLDRPSER TRGTRRLWER
LTGREARFVN HTLHTPARRI VDGLEPGDTL AIEDLTHLRS RTAKRGKKER HLHNLWPYAR
LRSLLEYKAA LRGVQVVAVD PRHTSQECPR CGHTAKENRK SQALFRCAAC GFQHNADWVA
AHNIALRAGP QALPQGIVAR RAGSTGMGRE GSGIAAGRCA PNLCKPARIL RVSSLHRFSS
ESPRLQPWGG LRIHSNQTL
|
|---|
| |