| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mesil_2140 |
|---|
| Symbol | |
|---|
| ID | 9251654 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus silvanus DSM 9946 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014212 |
|---|
| Strand | - |
|---|
| Start bp | 2152999 |
|---|
| End bp | 2154585 |
|---|
| Gene Length | 1587 bp |
|---|
| Protein Length | 528 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | 2-isopropylmalate synthase/homocitrate synthase family protein |
|---|
| Protein accession | YP_003685519 |
|---|
| Protein GI | 297566547 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.735632 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0397928 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCGAAA TTCTGGACAC CACACTGCGC GACGGCACCC AGGGGCAGGC GGTGAGCCTC
TCCAGCGACG ACAAAATAGC CATCGCCCGG CGGCTGGCGG CCTTTGGCGT GCCGCTCATC
GAGGGCGGCT GGCCGGGGTC GAACCCCAAG GATGCGGAAT TCTTCGCTCG GATGAAGGGG
GTGGATCTAG GAGCTAGCCA GCTTTGTGCG TTTGGCTCTA CCCGGCGCAA GGGGCTGCGG
CCGCAGGACG ACCCTTCGGT GCAGGCCATG CTGGAAGCAG CTACTCCGGT GGTCACGGTG
GTCGCCAAGT CCTGGGACTT TCACGTCACC GAAGCGCTCG AGGTGAGCTT GGAGGAGAAC
CTGCGCATGA TCGAGGAGAC CTACGCCTAC CTGGTTGCTC AAGGACGGCG GGTCATCCAC
GACGCCGAGC ACTTCTTCGA CGGCTTCAAG GCCAACCGGG GCTACGCCCT GGCGACGCTC
GAGGCCGCCG TGCGGGGCGG GGCCGACACG CTGTGCCTGT GCGACACCAA CGGCGGCAGC
CTGCCCGAGG AGGTCGCCGC GATTACCCGC GCCGTGGTAG AGGCTTTCCC GGGCGTTCGC
ATCGGCATCC ACCCCCACAA CGATGGGGAA CTGGCGGTGG CCAATGCGTT GGCCGCGGTG
CGGGCCGGGG CCACCCACGT GCAGGGCACC GTCAACGGCT ACGGTGAGCG CTGCGGCAAC
CTCAACCTCA CCAGCACCAT TCCCAACCTC ATCCTCAAGT ATGGGCTCGA GCTAGAGGGC
ATTCCGCGCG AGAAGCTGGC CGAACTGCGG GCACTCTCGC ACTACGTGGA CGAGCGGGCC
AACCTCACGC CCAACCTGCG GGCCCCCTAC GTGGGCGATG CGGCCTTCGC GCACAAGGGC
GGCATCCACG TCTCGGCAGT CCTAAAAAAT CCCCGCACCT ATGAGCATGT TCCTCCCGAG
GCGGTGGGCA ACACCCGCCG GGTACTGGTC TCCGACCTTT CGGGCCGGAG CAACCTGCTC
GCCAAGTTGG CCGAAGCGGG GGTAGAGGTA CCCAAGGAGA CAGCGGGAGC GCTCTTGGAG
GAGGTCAAGC AGCTCGAGCA CGCCGGCTAC TCCTTCGAGG GCGCCGAGGC AAGCTTTTAC
CTCCTGGCCC ACCGCCTGCG CGGGGGAGAG ATGCCTTTCA AGCTTCTGGG TTTTAGCGTC
TTTATGCACG CCAATGACGA CCGCCCCGAC ACCCCTACCT GGGCCGAGGC CACGGTGCGG
GTGAAGGTGG GAGAGAGCGT GCAGCACACC GCCGCCGAGA GCAAATTCGG CCCGGTTTCG
GCTTTGGACA TCGCCTTTCG CAAAGCCGTC CAGCCCTTCT ACCCCGAGAT CGCCGAGATC
GAGCTATCCG ACTACAAGAT GCGTATTCTG AGCGGGCAGG AGAGCGGAAC CGCGAGCGGG
GTGCGGGTCA TGATCGAGAT GGCCCGGGGC GGGGAGCGCT GGACCACCGT GGGAGCCAGC
CGCAACAGCC TCGAGGCCTC CCTCAAAGCC CTCACCGACG GCTACGCCTA CGCCTTGGTC
AAGACCCAGC CCGTCCTGGC AGATTAG
|
|---|
| Protein sequence | MIEILDTTLR DGTQGQAVSL SSDDKIAIAR RLAAFGVPLI EGGWPGSNPK DAEFFARMKG
VDLGASQLCA FGSTRRKGLR PQDDPSVQAM LEAATPVVTV VAKSWDFHVT EALEVSLEEN
LRMIEETYAY LVAQGRRVIH DAEHFFDGFK ANRGYALATL EAAVRGGADT LCLCDTNGGS
LPEEVAAITR AVVEAFPGVR IGIHPHNDGE LAVANALAAV RAGATHVQGT VNGYGERCGN
LNLTSTIPNL ILKYGLELEG IPREKLAELR ALSHYVDERA NLTPNLRAPY VGDAAFAHKG
GIHVSAVLKN PRTYEHVPPE AVGNTRRVLV SDLSGRSNLL AKLAEAGVEV PKETAGALLE
EVKQLEHAGY SFEGAEASFY LLAHRLRGGE MPFKLLGFSV FMHANDDRPD TPTWAEATVR
VKVGESVQHT AAESKFGPVS ALDIAFRKAV QPFYPEIAEI ELSDYKMRIL SGQESGTASG
VRVMIEMARG GERWTTVGAS RNSLEASLKA LTDGYAYALV KTQPVLAD
|
|---|
| |