| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mesil_1807 |
|---|
| Symbol | |
|---|
| ID | 9251317 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus silvanus DSM 9946 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014212 |
|---|
| Strand | + |
|---|
| Start bp | 1793872 |
|---|
| End bp | 1795608 |
|---|
| Gene Length | 1737 bp |
|---|
| Protein Length | 578 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | acyl-CoA dehydrogenase domain protein |
|---|
| Protein accession | YP_003685192 |
|---|
| Protein GI | 297566220 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.9558 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.985453 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGCAG ATCGTAAGTT GGCAAAAAAA GGCGGCGGCT GGCTGCTGGA AAAACCTGAG
GCCATCTTTA CCCCCGAGGA CTTCGACGAC ACCACCCGCA TGATCCAAGA TACCGTGCGG
CAGTTCGTGG AAAAGGAATA CCGTCCGGTA GCCGAGGCGA TGGAACACGG CGCCCTCGAG
CACAATATTC CCTTGCTCAA GAAAGCAGGC GAGCTGGGCC TTTTGGGGGT AGAGGTTTCA
GAGGAGTATG GCGGCCTCGA CCTGCCCAAA ACTGTTTCCA CGGTGATCGC CGAAGGGCTT
TCCCCGACCG GAGGTTTTAG CGTCAGCTAC GGGGTGCAAA CCAGCATTGG TCTGCTGCCG
TTGGTCTACT GGGGCACCAA GGAGCAGAAG GACAGGTACC TTGCCAAACT GGTCTCCGGC
GAGTTGATCG CCGCCTACTG CCTCACCGAG CCGCAGTCCG GCTCTGACGC GATGGGTGCC
AAGACCCGTG CCGAACTCAG CGAGGACGGC AAGTACTACA TCATCAACGG GACCAAGATG
TGGATCAGCA ACGCTGGCTT CGCTCATCTC TTCACCGTCT TCGCCAAAAC CAAGGAGGGC
CTCACTGCCT TTTTGGTCGA GCGGGACACG CCGGGGTTGC GTCTGGGCGG GGAAGAAAAG
AAGATGGGGA TCAAATCCTC GAGCACCCGC CAGGTATTCT TCGAGGACGT TAAGGTTCCC
GTTGAGAACG TGCTGGGCGA GCTGGGCAAG GGGCACAAGA TCGCCTTTAA CGTGCTCAAC
GTGGGACGCT ACAAGCTGGG GGCAGGGGCC ATCGGTGGAG CCAAGGAGGC CCTCGCACTT
TCTGCCAAGT ACGCTAAGGA GCGGGTCGCT TTCGGCCAGC CCATCGCCAA CTTTGGCCTT
ATTCAGCAAA AGCTCGCTGA AATGGCCTCG CGGATTTTTG CCGGGGAAAG CGCTGTATAC
CGCACGATGG GCTTGATCGA CGAAGCCATC GCGGGAAAAA CCGGAACCGA GGCGGTGCTA
GCGGGTATCG AGGAGTACGC AGTAGAAGCT AGCATCATCA AGGTGCTGGG GTCGGAGATC
CTCGACTATG CTGTGGACGA GGGCGTACAG ATTCATGGCG GCTACGGCTA TTCGGGTGAG
TACGCTATCG AGCGGGCTTA CCGCGACAGC CGCATCAACC GCATCTTTGA AGGGACCAAT
GAGATCAACC GCCTGCTGAT CCCTGGGATG CTCCTGCGGC GGGCCATGAA GGGCGAGCTT
CCGCTGGTAG ATGCTGCCAT GCGGCTGCAA AGGGAACTGC TCGAGCCCTC CTTTGACGAG
CCCGAGGACA AGGAGATGGC AGAGCTCGAG AACCTCAAGA AGCTAGTGTT GATGATCGCT
GGGCTGGCTG CGATGAAGTG GGGCACCAAG GTGGAGGAGG AGCAGGAGGT GTTGGCGGTG
GCCGCTGATA TCCTCATCGA TATCTACGCG GCCGAGTCGG CCCTGCTGCG TTCGCGCCGC
TTGGGGGGCG GGGTCTACGC GGACATGTCC CGGCTATACC AGTACCAAGC TGTTGACCGC
GCCCAAGCTG GCGCGCTGTC GGTGCTGCCC CGCCTAGCCG AGGGCGACGA GTTGCGGGGG
ATGGTCTCTG CAGCCCGCCG CTTGACCAAA CATGAACCGA TGGACTTGGT AGAAATACGC
CGCCGAATCG CCAAAGCGGT GCTCGAGCGC GATGGGTATC CACAGCCCAG AGCCTAA
|
|---|
| Protein sequence | MIADRKLAKK GGGWLLEKPE AIFTPEDFDD TTRMIQDTVR QFVEKEYRPV AEAMEHGALE
HNIPLLKKAG ELGLLGVEVS EEYGGLDLPK TVSTVIAEGL SPTGGFSVSY GVQTSIGLLP
LVYWGTKEQK DRYLAKLVSG ELIAAYCLTE PQSGSDAMGA KTRAELSEDG KYYIINGTKM
WISNAGFAHL FTVFAKTKEG LTAFLVERDT PGLRLGGEEK KMGIKSSSTR QVFFEDVKVP
VENVLGELGK GHKIAFNVLN VGRYKLGAGA IGGAKEALAL SAKYAKERVA FGQPIANFGL
IQQKLAEMAS RIFAGESAVY RTMGLIDEAI AGKTGTEAVL AGIEEYAVEA SIIKVLGSEI
LDYAVDEGVQ IHGGYGYSGE YAIERAYRDS RINRIFEGTN EINRLLIPGM LLRRAMKGEL
PLVDAAMRLQ RELLEPSFDE PEDKEMAELE NLKKLVLMIA GLAAMKWGTK VEEEQEVLAV
AADILIDIYA AESALLRSRR LGGGVYADMS RLYQYQAVDR AQAGALSVLP RLAEGDELRG
MVSAARRLTK HEPMDLVEIR RRIAKAVLER DGYPQPRA
|
|---|
| |