Gene Mesil_1798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMesil_1798 
Symbol 
ID9251308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus silvanus DSM 9946 
KingdomBacteria 
Replicon accessionNC_014212 
Strand
Start bp1786191 
End bp1788485 
Gene Length2295 bp 
Protein Length764 aa 
Translation table11 
GC content61% 
IMG OID 
Product3-hydroxyacyl-CoA dehydrogenase NAD-binding protein 
Protein accessionYP_003685184 
Protein GI297566212 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATCA AGAAAATAGG TGTTGTCGGC GCGGGAACGA TGGGCGGGGC CATCGCGGCC 
CTGGCGGCTT CGGCGGGGGT TCCGGTGGTG CTCTTGGACA TCCCAGGGCA GCAAGACAAG
CTCGAGCTGG TCAAGAAGGG CCTCGAGCGG CAGCTGAAGG CCAAACCTGC TGCTTTTATG
GACAAGGGTC GGGCTAGCTT GATCGAACTA GGCACTACCG AGGAACTAGC CAAGCTTAAA
GACTGTGACT GGATTGTCGA GGTCATCATC GAGAAGCCCG AGCCCAAGCA AGAGCTTTTC
GCTAAACTGG AAAGCGTTTG CAAACCTACC GCCATCGTTT CTTCCAACAC CTCGGGCATC
CCCATGCGGA CCCTACTCGA GGGCCGCTCG GAAGGCTTCC GTAAGCGATT CCTGGGTACC
CACTTCTTCG CCCCGGTGCG CTACTTGCAC CTTTTGGAGC TGATCCCCAC GCCGGACACC
GACCCCCAGG TGGTACAGAC CATGCGCTAC TTCGGAGAGC GCATTCTGGG CAAAGGCACG
GTGATCTGTA AAGATGCCCC TGGCTTCATC GCCAACCGAC TGGGCGTTTA CGGTATGACC
CAAGCCATGC GGTTGATGAT GGAGGAGGGG CTTACCATTG ATGAGGTGGA CGCCCTCACC
GGTCCCTTGG TGGGCCGCCC CAAGTCGGCC ACCTTCCGCA CCGGGGATAT CTCTGGGTTA
GACGTGCTCA AGCTGGTCTC CACTGAGCTT GCCCACACCA CCGGGGAAGA TTTCCGGATG
CCCGACTGGG TGGAGAACCT GATTCAGCAG GGCAACCTCG GTGACAAGAC CGGGGCGGGG
TTTTACAAGA AAGTCGGCAA GGACATCTTT ACCTACGACT ACCGCACCGG CGAGTACAAG
CCGCAGGAGA AACTGCGCCT TGCAGAGATT GCAGCCATCA AAGACTTACC GCTTTCTGAG
CGGCTGAAAA AGGTGGCTGA ACTTCCCGGC AAGTACGGTG CTTTCGCCCG TAAGCTCTTT
CTGATCACCG CACATTACGC GCTCGAGAAA GCCCCCGAGA TCGCCTACGA CATCGTGGCG
GTGGATCAGG CTATGGAGTG GGGCTTTGCC TGGGAGCAAG GCCCTTTCAA GAACATGGAC
GCGGTGGGCC TTGACTACCT CCGCCAGGGC TTTGCCGAGT TGGGCCTCGT TGAGCCGGAA
CTCCTGAAGA AGGCCCAGGG CAGCTTCTAC AAGGACGGCA CCTACCTGGG CTTCGATGGG
CAGTACCACT CCCTCCCCAG GAACCCCGCC CACATTACGG CTTCAGGGCT GCGCAAGGCC
GGGAAGGTAC TCTTAGAGGG CAAGGAAACC GCTCTGCTCG ACCTGGGGGA CGGGGTGGCT
CTCTTCGAGA ACCGGGCTAA GATGGGGACC CTCGGCGAAG GGGTGCTCCG AGAACTGCAC
AAAGCCCTCG ACTGGGTGGA GCAGAGCGAT TACCACGGTT TGGTGCTCTC CCACGACGAT
CCCCGCACCT ACTCGGCGGG CGCTAACTTG GCCCTGGTCC TGATGGGGGC GCAGGAAGGT
GACTGGGACG AGATGGCCCG GGCTGTACAC ACCTTCCAGC AGACCGCCAT GCGGCTGCGC
CGCTCGCCAT TCCCGGTAAT TTCGGCTCCT TTTGGCCTCA CGTTGGGTGG TGGGGCGGAG
TTCAGCCTGC ACTCAGACCG TATTCAGGCC CACGCTGAGC TGTATATGGG CTTAGTGGAG
GTGGGAGTGG GTCTGATCCC GGCGGGCGGC GGCACCAAGG AGATGCTTTT CCGTTTCACC
CAGGAGTTAT CTGCCTATGG TCCCGACATC GACCTCTTTG AGGGGGTGAA GAGGGCTTTC
CAGATGATCG CCTTAGCCCA GACCAGCACC AGCGCGCTCG AGGCCCGCAA CATGGGATTC
CTGCGCCACG GCGATGGTAT CAGCATGAAC CGCGATACCC TCATCTCTGA CGCCAAAGCC
CAGGTGTTGG CCCTGGCCGC AGGCTACGTG CCCCAACCCC CCATGAAGAT TCGTGCCTTG
GGCGCAGAGG GCATCGGCAA CCTGCGCTAC GCGCTGTGGC AGTTCCAGGA AGCTGGACAG
GCCTCCGAAC ACGATGCGCG TATCGGGGAG GAACTGGCTT ACGTGCTCTG CGGCGGGGAC
GGCCCGGCCC GTGAGGTCAG CGAACAGGAC ATCCTGGACC TCGAGCGCGA GGCCTTCCTC
AAGCTCTTAG GTACGAAGAA GACCCAAGAG CGCATCGCGC ACATGTTGAA GACTGGGAAG
CCACTGCGGA ACTAG
 
Protein sequence
MRIKKIGVVG AGTMGGAIAA LAASAGVPVV LLDIPGQQDK LELVKKGLER QLKAKPAAFM 
DKGRASLIEL GTTEELAKLK DCDWIVEVII EKPEPKQELF AKLESVCKPT AIVSSNTSGI
PMRTLLEGRS EGFRKRFLGT HFFAPVRYLH LLELIPTPDT DPQVVQTMRY FGERILGKGT
VICKDAPGFI ANRLGVYGMT QAMRLMMEEG LTIDEVDALT GPLVGRPKSA TFRTGDISGL
DVLKLVSTEL AHTTGEDFRM PDWVENLIQQ GNLGDKTGAG FYKKVGKDIF TYDYRTGEYK
PQEKLRLAEI AAIKDLPLSE RLKKVAELPG KYGAFARKLF LITAHYALEK APEIAYDIVA
VDQAMEWGFA WEQGPFKNMD AVGLDYLRQG FAELGLVEPE LLKKAQGSFY KDGTYLGFDG
QYHSLPRNPA HITASGLRKA GKVLLEGKET ALLDLGDGVA LFENRAKMGT LGEGVLRELH
KALDWVEQSD YHGLVLSHDD PRTYSAGANL ALVLMGAQEG DWDEMARAVH TFQQTAMRLR
RSPFPVISAP FGLTLGGGAE FSLHSDRIQA HAELYMGLVE VGVGLIPAGG GTKEMLFRFT
QELSAYGPDI DLFEGVKRAF QMIALAQTST SALEARNMGF LRHGDGISMN RDTLISDAKA
QVLALAAGYV PQPPMKIRAL GAEGIGNLRY ALWQFQEAGQ ASEHDARIGE ELAYVLCGGD
GPAREVSEQD ILDLEREAFL KLLGTKKTQE RIAHMLKTGK PLRN