| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mesil_1623 |
|---|
| Symbol | |
|---|
| ID | 9251129 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus silvanus DSM 9946 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014212 |
|---|
| Strand | + |
|---|
| Start bp | 1622898 |
|---|
| End bp | 1624040 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | Alpha-galactosidase, NPCBM associated NEW3 domain protein |
|---|
| Protein accession | YP_003685017 |
|---|
| Protein GI | 297566045 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0478497 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.962511 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTGCGTA TCCTCGCTGC GTTGGTGCTT TGTGTGGGTA TGCTGGCCTC TGCCCAAAAC
TATCGGGGGT TGGCGCTATA TACTCCCTAT CCGGCCCAAA GTGTGGCTAC GGGGGAAACG
GTTACTTTGC CCATCACTAT CAAAGGTTTT GGCTTGAATC CCCAGGTGGT GCAGGTGCGG
GTAGCCGAAG CGGCCTCGGG TTGGAAAGCC AGCCTGCTAG GATCGGGGCG GGTGGTGAGC
GCGGTGTATG TACTGCCGGA GGGGGAACAA AGCCTCACGC TGCGCCTAGA GCCCCCTTCT
GGGGTGAAAT CCGGTACCTA CCGCTTCCGC TTGGTGGCCG AAGGGCAAAA CACCCGGGCC
GAACTCCCCA TCTCGCTTAC GGTGGGACAG GTGTTGCCCC GCAGGCTTAG CCTCGAGACC
GACTTGCCCG TACTCAAGGG GCCCCCTTCG GCCAGCTTCC GCTACCGGGT AACCCTCAAA
AACGAGAGCG ATCAGGATTT GCTGGTCAAC CTCGAGGCGG ACGCCCCCAA GGGTTTTCAG
GTAAGCTTCA CCCCTTCCAT TGGTAGCCAG GAGGTGACCA GCCTACCGGT AAAAGCCGGG
GAATCCAAAG ACCTGGATGT AGCGGTGTCC CTACCTCAGG ACGTAGAGGC CAAACCCTAT
GCGGTCACCT TGCGGGCTTT GGCTGGAGAG ACCAAGGCCG AGCTAGTGGT GAACCTCGAC
GTGACCGGCA CGCCGCAGCT CAGTCTTAGC ACCCCGGAGG GAAGGCTTTC CGGGCGGGCC
TACGCTGGGC AGGAAAACCC CGTCAAACTG GTGGTGAAAA ACACCGGTAG CGCTCCGGCG
GAGGGGGTGA GCCTCTCCTC CAGTGAGCCC TCAGGCTGGG AGGTCAAGTT CGATCCTGAG
AAGATCGACA AGATTGCTCC GGGGCAGGAG TCCCAAGTTA CCGCCCGGAT CAAGCCTTCG
CCCCGTGCCG TCGCAGGGGA CTACATGGTT ACCCTGCGGG CTTCGGCGGG CAGTGCATCG
GCCTCTGCTG ACTACCGCGT CACTGTGCAG ACTTCGACGT TGTGGGGCCT GGTGGGCATA
GTCTTGGTGG CCCTAGCGGT GGTGGTGGTA GGGTTTGCGG TGTCTCGCTA TGGCCGGCGG
TGA
|
|---|
| Protein sequence | MLRILAALVL CVGMLASAQN YRGLALYTPY PAQSVATGET VTLPITIKGF GLNPQVVQVR
VAEAASGWKA SLLGSGRVVS AVYVLPEGEQ SLTLRLEPPS GVKSGTYRFR LVAEGQNTRA
ELPISLTVGQ VLPRRLSLET DLPVLKGPPS ASFRYRVTLK NESDQDLLVN LEADAPKGFQ
VSFTPSIGSQ EVTSLPVKAG ESKDLDVAVS LPQDVEAKPY AVTLRALAGE TKAELVVNLD
VTGTPQLSLS TPEGRLSGRA YAGQENPVKL VVKNTGSAPA EGVSLSSSEP SGWEVKFDPE
KIDKIAPGQE SQVTARIKPS PRAVAGDYMV TLRASAGSAS ASADYRVTVQ TSTLWGLVGI
VLVALAVVVV GFAVSRYGRR
|
|---|
| |