Gene Mesil_1574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMesil_1574 
Symbol 
ID9251078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus silvanus DSM 9946 
KingdomBacteria 
Replicon accessionNC_014212 
Strand
Start bp1572625 
End bp1573782 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content65% 
IMG OID 
Productintegrase family protein 
Protein accessionYP_003684972 
Protein GI297566000 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00294023 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.46427 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGAC TGACGAACAA ACCCCGTAAA CGCAAGGATG GGCGCTTCGA GGTACGCCTG 
ACCCTACGCG AGAACGGCGT ACCGGTGCAG GTCAGTGTCT ACGCTCAGAC CGCCGCTGAA
GCCGAGCGCA AGGCCCGCGA CCTGAAGACC CGAGCCGAGC GGGGCCAGTT CACCCGCGAC
CGGAGCACCA CAGCAGGGTA TGCCCGGCTG TGGCTGGAGC GCAAGGCCAA AGAGGTCAGG
CCGCGCACCG CTGAACTCTA TCGGCTCGAA CTGAGCTATG CCCTGCCCTC ACTCCAAGAC
CCCGAGGCCC CTGACGCCCT GGGCTCGAGG CCCTTGCAGG AGGTGAAGCC CGCCCACATC
CGCGAGGTGC TGGATGGGCT GAGCAAGCGC TACTCCATCC GCACCGTGAA GATGGTGCGG
CAACGGTTGT GGCAGGTATT CCGGGACGCT TTAGACATGG AGCTCATTTA CCGCAACCCG
GTGGACCCGG TGCGCATCAA GACTCCCCGA GGTCAGAGCA AGGCCAAGGT AGGGCGAGCC
CTCGAGCCCC ACGAGATCGC CGCCTTGCTA TCTGCCCTCG ACCAACACAA AGACCCGAGA
ACCGCCCTGG CCCTCAGGCT GATGCTGGCC TGTGGGCTAC GCCGGGGTGA GGCTTTGGGG
TTGCAGTGGC AAGACCTTGA CCTTGGGGCC GGAACCCTTA CTGTCACGCG GGCTTGGACC
GATGACGGCA AGCGCGGGGT GCTGACCCTG CCCAAGACCC ACACAAGTGG GCGCACCGTG
CCGATCCCTC ACGCGACGCT GGAGCGCTTG CAACAGTACC GGGCCTGGTA TGCCGAGCGG
CTGGGGGACC CTCGCCCGGA AGCCTGGGTA TTCCCCGGCA ACGACCCGAG CAAGCCGCTC
AATCCCCATG CGCCCAACTG GGCCTTGAAG CGCATCACCG AGCGGCTGGG CATAGGCCCC
TTGCGGGTGC ATGACCTGCG CCATAGCTAC GGCTCACACA TGCTGGCTAA CGGTGCGCCC
CTCGAGCTTG TGAGCGAGCG GATGGGGCAC GCTAACGCGA ATATCACCCT GGGGGTGTAC
CGGCATGTGC TCGAGCACGA ACGCAAAGGC TGGATCATTG ACCCCGAGGA CCTGCTAGGC
CCCCGCGCTA AAGCCTGA
 
Protein sequence
MPRLTNKPRK RKDGRFEVRL TLRENGVPVQ VSVYAQTAAE AERKARDLKT RAERGQFTRD 
RSTTAGYARL WLERKAKEVR PRTAELYRLE LSYALPSLQD PEAPDALGSR PLQEVKPAHI
REVLDGLSKR YSIRTVKMVR QRLWQVFRDA LDMELIYRNP VDPVRIKTPR GQSKAKVGRA
LEPHEIAALL SALDQHKDPR TALALRLMLA CGLRRGEALG LQWQDLDLGA GTLTVTRAWT
DDGKRGVLTL PKTHTSGRTV PIPHATLERL QQYRAWYAER LGDPRPEAWV FPGNDPSKPL
NPHAPNWALK RITERLGIGP LRVHDLRHSY GSHMLANGAP LELVSERMGH ANANITLGVY
RHVLEHERKG WIIDPEDLLG PRAKA