Gene Mesil_1546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMesil_1546 
Symbol 
ID9251047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus silvanus DSM 9946 
KingdomBacteria 
Replicon accessionNC_014212 
Strand
Start bp1547559 
End bp1548773 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content59% 
IMG OID 
Productbranched chain amino acid ABC transporter amino acid-binding protein 
Protein accessionYP_003684944 
Protein GI297565972 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.102523 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGAG TGCTGATGTT GGGGATGGTT GCAGCTTTGA GCTTGGGGAG TGCCCAGCAA 
ACCAAGACGG TCAACCTGCT GTGGTCGGGG GCTATTACCG GGCCGACTTC CGATGTGGGG
GGGCCTTATG GGGCTGGGGT GGAGGACTAT TGCAAGTACG CCAACGAGCA AAAACTGATC
CCTAGCTTCA CCATCAACTG CACGGTGCGC GATGACCAGT ACCAAAACCC CATTACCCAA
CGCATCTTCG AGGAGGCCTT GGACCGGGCT AAACCGGCCA TATATCTAGG GTACAGCACG
GGGGCAATGC TCCAGCTCAA GCCGCTCATC CAGGAAGTCA AGATGCCGAC TATCCCGGCT
TCGGCGCATA TCGGCCTTAT TGAACCGCCC AACAACACCT ACATCTTCTT GCCGGTGAGC
AGCTACTCCG AACAGATCGT AGCCCTAATG GAGTATATCC ACCGCGAACT CAAGAAGAAT
GCCCGCATCG CCCTGGTGGT GAACCCTAGC CCCTTCGGAC GGGCGGTGGT AGACCACGCC
AAGCGGGCTG CTCAGCGTTT GGGACAGACC ATCGTCGCGG TACAGGAGGT GGGCGCTAAC
AACCTTGACA ACACCGCTTT GCTGCGCAAC CTTGATTCGC AGAATGTAGA GTTTATCCTG
CACCAGAACG TGGCCGGGCC GGTGGCGAAC ATCCTTAAAG ATGCCAAGCG CCTAGGGCTC
GACAAGAAGA TCCGCCAAAT GGGCGCGGTT TACACCGGCG GTTCGGATTT GATCCGGCTG
GCCGGGGATG CTGCGGAGGG CTACTTGTGG GCCTCGAGCT ACTACACCCT CGACGAGAAC
GTTCCCGGTA TCACCTTGCA AAAGCAGCTT GCGCAGAAAT ACGGGCGCAG CACGGATATC
CTGGGCAGCA CCAACTACAC CGCCGGGATG CTGGCTGCAG CCATCGCAGT GGAGGCCATG
AAGCGGGCGG CTCAGCGCTT CAACGGGCGC ATCGATAACG AGACGGTCTA CCAGGCGATC
ATCGGGATGA ACGGTCCCAA CGCCTTCAAG CCGGGTTTTG CGGTTTCTAC CAAGTCCGGA
ATCGAGATCG ACTTTACCAA GAGCGAACAG ACCGGGGCAG AGGGCTTACG GGTGCTCGAG
GCCAAGGGCG GAAAGTTTGT GCCGATCACC GAGCCCTTCA CCTCGGCGCT TTTCCGGCAG
GTAAGAAATC CCTGA
 
Protein sequence
MKRVLMLGMV AALSLGSAQQ TKTVNLLWSG AITGPTSDVG GPYGAGVEDY CKYANEQKLI 
PSFTINCTVR DDQYQNPITQ RIFEEALDRA KPAIYLGYST GAMLQLKPLI QEVKMPTIPA
SAHIGLIEPP NNTYIFLPVS SYSEQIVALM EYIHRELKKN ARIALVVNPS PFGRAVVDHA
KRAAQRLGQT IVAVQEVGAN NLDNTALLRN LDSQNVEFIL HQNVAGPVAN ILKDAKRLGL
DKKIRQMGAV YTGGSDLIRL AGDAAEGYLW ASSYYTLDEN VPGITLQKQL AQKYGRSTDI
LGSTNYTAGM LAAAIAVEAM KRAAQRFNGR IDNETVYQAI IGMNGPNAFK PGFAVSTKSG
IEIDFTKSEQ TGAEGLRVLE AKGGKFVPIT EPFTSALFRQ VRNP