Gene Mesil_1471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMesil_1471 
Symbol 
ID9250971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus silvanus DSM 9946 
KingdomBacteria 
Replicon accessionNC_014212 
Strand
Start bp1469583 
End bp1471805 
Gene Length2223 bp 
Protein Length740 aa 
Translation table11 
GC content61% 
IMG OID 
Productprotein-export membrane protein SecD 
Protein accessionYP_003684871 
Protein GI297565899 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000674169 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTCGCGCA AATGGGTAAC TGGAATTTTC TTACTCTTGC TGTTTTTGGC TTCCCTGCTG 
GTGCTATGGA AGCCCTGGGC TCCGGGTGAG CCCAAAATCA AGCTAGGCCT GGACTTGCAA
GGTGGCTTGC GCATCGTTCT CGAGCCCACC ACCCCTACCT TCACTCGCCA AGACCTAGAC
GTAGCCCGCA CGGTGATCGA GAACCGAGTG AACGCCCTTG GCGTAGCTGA GCCCTTGGTT
CAGATCCAGG GCAACCGCCG CATCGTGGTG GAGCTCCCTG GGCTGTCCAA AGCTGATGAG
GACCGGGCCA TTCGGCTCAT CGGCCAGACT GCGGTGCTGG AGTTCCGCAT CCTCAACGAA
AACGCTCAGG GGCTTACTGT CGCGGATATC AATCAGCAAA AGCGGGCTAA CCCCAACCTA
GACACCAAAT CGCTCGAGCA GCGGCTGTTC AAACAGAGCG ATTTAGGCCC GGTGCTGCTC
ACCGGTAAGG ACCTCGCTAA CGCCCAGGCC ACCTTCGACC AGTTTGGCCG CCCCCAGGTC
TCGCTCACCT TCACCGGCGA GGGGGCCAAG AAGTTTGAGG AGGTCACGCG GCAAAACATA
GGTCGCCGTC TGGCGGTGGT GCTAGACGGC AAGGTCTTTA CCGCCCCCAC CATCCGTAGC
GCTATCAGCG GCGGCCAGGC GGTGATCGAG GGGCTTTCGG GGCTCGAGGA AGCCTCTGAG
ATCGCCCTAG TACTGCGCTC TGGTTCGCTA CCGATCAGCC TGCGCGAAGC CGAGACCCGC
GCCATCGGCC CCACCCTGGG CCAGGATGCT ATCCGCTCGG GCATCTACGC GGGCATCGTC
GGAACAGTGC TGATCTTTGT GCTCATCTTT GCCTACTATG GCTTCTGGCT GGGGCTGGTA
GCGGCTTTGG GCCTGATCTA TACCAGCGTG CTGATCCTGG GGATCATCTC TGGGCTCAGC
GCCACATTGA CCTTACCGGG CATCGCTGGC CTGATTCTGA CCCTGGGCGC TGCTGTAGAC
GGCAACGTGC TCTCCTTCGA GCGCATCAAG GAGGAGATCA AGCACGGCAA ACGGTTCCGC
CAGGCTATTC CCGGCGGTTT CCAGCACTCG ATCATCACCA TTTTGGATGT AAACGCCTGC
CACCTCCTGG CGGCGGCGGC TTTGTACCAG TATTCCACCG GCCCGGTCAA GGGCTTCGCG
GTGATGCTGG CGGTGGGCGT GGTAGCCTCG GTATTCTCCA ACCTGGTGTT CAGCCGGTGG
CTCTTGGACC GCATCGCTGA GCGCCGCGAG GTCAAACCGC TGTACTGGGT CTGGGGCTCG
CGCTTCCAGT TCATGAAGTG GGCCCGTTAC ATCACCACAT TCAGCCTGAT CCTCGCTGTT
ATCGCCGGAA GCATCGCATT GGTCAAAGGA TTCAACCTCG GCATCGACTT CACTGGGGGC
ACGGCCTTTA CTGTACGAAC TGGAGATAAA ACCACCACCG AGGATATTCG CAGCTTCCTG
AGCCAAGCAG GCATCCCCGG AGCTGCCGGG AACGAGGCCA TCATCACCGC CGTGGCCACC
CAACAAGGCC GCGAGTACAC CGTGCGGGTG CGGCAGCTCA CCGAGGAGAA CCGCATCCAG
CTCGAGCGCC TCTTCCAAGA GCGCCTCTCC GCTCAGGTCT TGCAATCCGA AACGGTAGGC
CCCTCGGTAG GGTCGGAGCT AAGGCGCAAC ACCATCTACG CGGTGCTGAT CGGGCTGGCG
CTGATCATGG TCTACGTGGC CTTCCGCTTC GACTGGATGT TCGGCCTGGG CAGCATTATC
GCGGTGGCCC ACGACGTAGC TATCGTGGCT GGGATGTATA GCCTGTTCGG GCTCGAGTTC
ACCATCCCCA CCGTGGCGGC CTTGCTCACC ATCATCGGTT ACTCACTCAA CGACTCGATC
ATCATCTCCG ACCGCATCCG CGAAAACCTC AAAGACCCGC AAAACCGGGG CAAGAGCTAC
CGGGAGATCT TCGACTTGGC CATCAATCAG ACCCTCTCGC GCACCGTCAT GACCACCCTC
ACCACCTTGC TTCCGGTGAT CGCCTTGCTG TTCTTAGGCG GCTCGGTGCT GCGCGACTTC
TCGTTGGCCA TCACGGTAGG GATATTCGTA GGGACCTACT CCTCTATCTA CGTGGTGTCG
GCCTTGGTGG TAGCCTGGAA GACCCGCCAG GCCCAGCGGC AAAAACTGGC CAAAGCCCGC
TAG
 
Protein sequence
MSRKWVTGIF LLLLFLASLL VLWKPWAPGE PKIKLGLDLQ GGLRIVLEPT TPTFTRQDLD 
VARTVIENRV NALGVAEPLV QIQGNRRIVV ELPGLSKADE DRAIRLIGQT AVLEFRILNE
NAQGLTVADI NQQKRANPNL DTKSLEQRLF KQSDLGPVLL TGKDLANAQA TFDQFGRPQV
SLTFTGEGAK KFEEVTRQNI GRRLAVVLDG KVFTAPTIRS AISGGQAVIE GLSGLEEASE
IALVLRSGSL PISLREAETR AIGPTLGQDA IRSGIYAGIV GTVLIFVLIF AYYGFWLGLV
AALGLIYTSV LILGIISGLS ATLTLPGIAG LILTLGAAVD GNVLSFERIK EEIKHGKRFR
QAIPGGFQHS IITILDVNAC HLLAAAALYQ YSTGPVKGFA VMLAVGVVAS VFSNLVFSRW
LLDRIAERRE VKPLYWVWGS RFQFMKWARY ITTFSLILAV IAGSIALVKG FNLGIDFTGG
TAFTVRTGDK TTTEDIRSFL SQAGIPGAAG NEAIITAVAT QQGREYTVRV RQLTEENRIQ
LERLFQERLS AQVLQSETVG PSVGSELRRN TIYAVLIGLA LIMVYVAFRF DWMFGLGSII
AVAHDVAIVA GMYSLFGLEF TIPTVAALLT IIGYSLNDSI IISDRIRENL KDPQNRGKSY
REIFDLAINQ TLSRTVMTTL TTLLPVIALL FLGGSVLRDF SLAITVGIFV GTYSSIYVVS
ALVVAWKTRQ AQRQKLAKAR