Gene Mesil_1413 details

Gene Information

• Locus tag: Mesil_1413
• ID: 9250913
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Meiothermus silvanus DSM 9946
• Kingdom: Bacteria
• Replicon accession: NC_014212
• Strand: +
• Start bp: 1402745
• End bp: 1406098
• Gene Length: 3354 bp
• Protein Length: 1117 aa
• Translation table: 11
• GC content: 63%
• Product: alpha-1,6-glucosidase, pullulanase-type
• Protein accession: YP_003684814
• Protein GI: 297565842

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 11
• Fosmid unclonability p-value: 0.960844
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCGTTTGT GGTGGGCGTT ATGGCTGGCC ATAGGTTGGG GGTTGGGGGT TGCTGCGGCG 
GCCCCGGTGA CTTTCAGGTA CACCCCCCCG CAGGGAACCG AGGTGCGTAC CGTCAGCCTG 
CGCGGGCAGA TGAACAACTG GGGCGAAACC CCTATGCGCC TTGAGAACGG GGTCTGGACC 
GTGACCGTGG AGGTGCCACC GGGGCGGGTG CAGTACAAGT TCTTCATCAA CGGGCAGTGG 
CCGCGCGATA TGTGTGCTGG AGGCAACCTG GCCGGGCCAG ATGGCAAGAT TGACCCCGAG 
GCTGAGGGTT GCGTGGACGA CGGTAACGGT GGGAAGAACG CCTTCCGCAC CGTGAGTGGT 
CAGGCTGCCC AGACCCCCCC GATAGCGCCC CGGGCCGACG CCAAACCCGC CCCCCCGCTA 
GAGGCCAGTA AAGCCCGCAT CCACTACTTC CGCCCGGACG GCAACTATGC GGGTTGGGGC 
TTGCATTTGT GGGAGGACAC CCTCGAGCAG GTGGAGTGGA GCAAACCCTT CCCGCCCACC 
GGCCAGGACG ACTACGGTCT GTACTGGGAC TTCCGCCTCA AAGAGGGGGC CAAGAAAGTC 
GGGTTTATCG TCCATAAGGG CGATGAGAAA GACCCCGGCC CGGATATGTT CCTCCTGCTC 
GACCAGCACG GGCGCGAGGT CTGGGTGCTC TCGGGTAGCA CCCGGATCTA CACCCAGCGC 
CCGGATACCT CGGCCATCCC CACCGGTGAC CTGTCCAAGG CCCAGGCCCA TTGGTTGACC 
CGCGATACCG TAGCGTGGAA CCCCACGGGT TTCACCCAGG GAGCCACGGT GCGGCTCTTC 
TACAGCCCCT CGGCCCGCCT CAACCTGACC CGCGACGGGA TCACCGGGGG GTTCCCCATC 
ACCCTCGAGC CCGCCACGCT CTCCGAGGCG CTCAAGGCCA AATATCCTCA CCTGCGCGAG 
TTGCGGGCTT TCAAGTTACC GGCGGACGAA CTCGAAAAGG TTCCCGGCAT CCTCAAGGGG 
CAGTTCGCGG TGGCGGCTTT CGGCGCCGAT GGCAAGCTCC TCGATGCCAC TTCCCTGCAA 
ATCCCCGGTG TGCTCGACGA CCTCTTTTTC TACGATGGCC CGCTCGGGGT AACCTTCGCC 
AACGACGTCC CCACCCTGCG CCTGTGGGCG CCTACGGCCC GCTCGGTCAA GCTGTTGCTC 
TTCGATTCAT CCACAGCGCA AAGCCCCAGT CAGACGCTCG AGATGACCGA GGAGAAAGGG 
GTCTGGAGCC TCGCTGGGCG GCCCAATTGG AAAAACAAAT TCTACCTCTA CGAGGTTCAG 
GTCTTCGTAC GGAGCACCGG GAAGATCGAG ACCAACCAGG TTACCGACCC CTACTCGCTC 
TCGCTTTCGC TGAACTCCAA GCGCAGCCAG ATCGTAAACC TGAACGACCC GGCCCTCAAA 
CCCCAGGGCT GGGATGCCTT ACGCAAGCCC CCCTTGGACG CCTTCGAGGA CATAGTGCTC 
TACGAACTTC ACGTGCGGGA CTTCAGTGCC TCGGATCCCA GTGTCCCTGC CGACCTGCGC 
GGGACCTTCA AGGCTTTCAC CTTGCGGAAC TCGAACGGCA TGAAGCATCT GTCGAGGCTG 
GCCCAGGCTG GGCTAACCCA CATTCACCTG CTTCCTACCT TCGATATCGC CACCATCAAC 
GAGGACAAGT CCACCTGGAA AACCACCCCC GACCTCTCCC AGCTTCCTCC CGACTCGGAG 
GAGCAGCAGG CGGCGGTGGC TGCCATTCGC GGTCAGGACG GCTTCAACTG GGGCTACGAC 
CCCTATCACT TCAACGTGCC GGAGGGTAGC TACTCCACCA AACCTGACGG TCCGTCGCGC 
ATCGCGGAGT TCCGCGAGAT GGTGCAGAGC CTCAACGATA TTGGCTTGCG GGTGGTGATC 
GACGTGGTCT ACAACCACAC CCACGCGGCG GGCCAAGACG AGAAGTCGGT CTTCGACCGG 
ATTGTGCCCG GCTACTACCA TCGCCTCAAC AAAGATGGCA ACCTCGAGAC CTCCACCTGC 
TGCGCCAACA CCGCCAGCGA GCACCGGATG ATGGAGAAGT TCATGGTGGA CTCGGTAGTG 
CTGTGGGCCA AGGCCTACAA GGTGGACGGC TTCCGCTTCG ACCTGATGGG CCACCACATG 
AAGGCCAATA TGGAGCAGGT GCGCAGGGCG CTGGATGGCC TGACGCTGGA GAAGGACGGC 
GTGGACGGCA AGAAGATCTA CGTCTATGGT GAGGGCTGGA ACTTCGGCGA GGTCGCCAAC 
AACGCCCGGG GGGTGAACGC CACCCAAATC AATTTGGCCG GAACCGGCCT CGGCACCTTC 
AACGACCGCA TCCGCGACGC TATCCGCGGT GGGAACCCCT TCGGCGACCT GCGCGAGCAG 
GGCTTCGCTA CCGGTCTTTT CAGCGATCCC AGCAACTTCA CCAACAAACA AGGAAACGCT 
GAAGCCCAGC GCAACCGGCT ACTCATGCTT ACCGACTGGC TCAAAACTGG GCTGGCGGGG 
GGTCTCAAGA ACTACAAGTT CACTGACCGC AGCGGCAATC AAGTAAGCGG TGAACAGGTC 
AAGTACGGTG ACGCCCCGGC AGGCTATACT TTGGACCCTC AGGAGACCAT CAACTATACC 
TCCGCCCATG ACAACGAAAC GATCTGGGAC GCGGTGCAGG CCAAGGCCTC GGAGAAGGAC 
AATCTCGCCG ACCGGGTGCG GATCAATAAC CTGGCCCTGA GCCTGGTGAT GCTCTCTCAG 
GGTGTGCCTT TCTTCCACGC CGGTGATGAC CTCCTGCGCT CGAAGTCCCT CGACCGCGAC 
AGCTACGACT CGGGGGATTG GTTCAACCGA ATCGACTGGA CTTACCAGAC CAACAACTGG 
GGGGTAGGCT TGCCCCTGGC CGATAAAAAC CGCGACAACT GGCCCTGGAT TAAACCCCTC 
TTGGCCAACC CCGCCCTCAA GGCCAGCCCC GCCGACATCC AGTTCGCCAC CCGCTACTTT 
CAGGAGTTGC TGCGCCTGCG CAAAAGCAGC CCCCTATTCC GCCTGCGCAC CGGTGAGGAC 
GTGCAGAACC GCCTCGTCTT CCTCGATACC CGCAATCAGC CGGGGGTGGT GGCGATGCTC 
CTAGAGGATC GGCGCCAGGG CCTCGCCGAC CTGGATCCCA AGTATCAGCG CATCCTGGTG 
GTCTTCAACG CTGCCCCGCA GGCTCTTCGG CTTACTGCCA ACCTGCCCGG CAACTGGCAG 
CTTCACCCCC TCCAGCGGGA CTCGGTGGAC GCGATCACCA AGCAGGCGGC TTTCTCCGGT 
GGGGTCTTTA GCGTTCCGGG CCGTACTACC GCCGTCTTCG TGCTGCCCCA GTAG 

 

Protein sequence

MRLWWALWLA IGWGLGVAAA APVTFRYTPP QGTEVRTVSL RGQMNNWGET PMRLENGVWT 
VTVEVPPGRV QYKFFINGQW PRDMCAGGNL AGPDGKIDPE AEGCVDDGNG GKNAFRTVSG 
QAAQTPPIAP RADAKPAPPL EASKARIHYF RPDGNYAGWG LHLWEDTLEQ VEWSKPFPPT 
GQDDYGLYWD FRLKEGAKKV GFIVHKGDEK DPGPDMFLLL DQHGREVWVL SGSTRIYTQR 
PDTSAIPTGD LSKAQAHWLT RDTVAWNPTG FTQGATVRLF YSPSARLNLT RDGITGGFPI 
TLEPATLSEA LKAKYPHLRE LRAFKLPADE LEKVPGILKG QFAVAAFGAD GKLLDATSLQ 
IPGVLDDLFF YDGPLGVTFA NDVPTLRLWA PTARSVKLLL FDSSTAQSPS QTLEMTEEKG 
VWSLAGRPNW KNKFYLYEVQ VFVRSTGKIE TNQVTDPYSL SLSLNSKRSQ IVNLNDPALK 
PQGWDALRKP PLDAFEDIVL YELHVRDFSA SDPSVPADLR GTFKAFTLRN SNGMKHLSRL 
AQAGLTHIHL LPTFDIATIN EDKSTWKTTP DLSQLPPDSE EQQAAVAAIR GQDGFNWGYD 
PYHFNVPEGS YSTKPDGPSR IAEFREMVQS LNDIGLRVVI DVVYNHTHAA GQDEKSVFDR 
IVPGYYHRLN KDGNLETSTC CANTASEHRM MEKFMVDSVV LWAKAYKVDG FRFDLMGHHM 
KANMEQVRRA LDGLTLEKDG VDGKKIYVYG EGWNFGEVAN NARGVNATQI NLAGTGLGTF 
NDRIRDAIRG GNPFGDLREQ GFATGLFSDP SNFTNKQGNA EAQRNRLLML TDWLKTGLAG 
GLKNYKFTDR SGNQVSGEQV KYGDAPAGYT LDPQETINYT SAHDNETIWD AVQAKASEKD 
NLADRVRINN LALSLVMLSQ GVPFFHAGDD LLRSKSLDRD SYDSGDWFNR IDWTYQTNNW 
GVGLPLADKN RDNWPWIKPL LANPALKASP ADIQFATRYF QELLRLRKSS PLFRLRTGED 
VQNRLVFLDT RNQPGVVAML LEDRRQGLAD LDPKYQRILV VFNAAPQALR LTANLPGNWQ 
LHPLQRDSVD AITKQAAFSG GVFSVPGRTT AVFVLPQ