| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mesil_1406 |
|---|
| Symbol | |
|---|
| ID | 9250905 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus silvanus DSM 9946 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014212 |
|---|
| Strand | - |
|---|
| Start bp | 1394452 |
|---|
| End bp | 1395573 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
|---|
| Protein accession | YP_003684807 |
|---|
| Protein GI | 297565835 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0200514 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTATGA TTCCGATTAT CGATTTGCAG CGCGAATACC AAACCCTCAA GACCCAGATT
GACGCAGCAG TGGGCCGGGT GCTGGCCTCG GGGAGTTATA TCGGGGGGCC GGAAGTAAGT
GCTCTCGAGG CCGAACTTTC CAGCTACCTA AGCAGTCCGT ACGTGATCAC CGTGGCCTCG
GGGACCGATG CCCTCTTCAT CGCCCTGCGG GCCATGGGGG TAGGACCGGG GGACGAGGTC
ATCACCACCC CCTTCACCTT CATCGCCACC GTGGAGGCAA TCCAGCACGC AGGGGCCAAA
CCGGTGCTGG TGGATATTGA CCCCCAAACC TTCAACCTCG AGCCCGCCCA CCTGGAGTCC
GCCCTCAGCG AGCGCACAAG GGCGATTCTC CCCGTACACC TCTACGGCCA GCCCGCCCCT
ATGCGGGAGA TCCGGGCCTT CGCCCAACAA CACCGGCTGC TGATCCTGGA AGACGCCGCC
CAGGCCATCG GGGCGCGCTA CTGCGCGGTA GATAGGGAGC CAGGTAGAAT GGCCGGGAAT
CTGGGCGACG CGGCAGGTTT TAGCCTCTAC CCTACCAAGA ACCTTGGCGC TTACGGGGAT
GCCGGGTTTA TCACCACCTC GAGCCCGCAG ATCGCCGAGG AAGCCCGTTT GATCGCAGCG
CACGGCTCGA AGATGCGCTA TCACCATATA CGGCCAGCGG GTTACACCAG CCGCCTCGAT
GCTTTGCAGG CTGCCATCCT GCGGGTCAAA CTTCCCTACC TGGAAAGCTG GAACACCCGC
CGCCGCCACA TCGCCCGCTT ATACGACGAG GGGTTGAAAA ACCTAGTAGA AACCCCCTAC
CAAGCACCCT ACTCCTACCA CATCTACCAC CAGTACACGG TGCGCACCCC CGAGCGCGAC
CGGCTCCTGG CTTTTCTCAA GGAAAACGGG GTGGGCAGCA GCGTTCACTA CCCCCTACCG
GCCCACCTGC AACCCGCTTA CCGCGACTTG GCCCCCCAAG GCAGCCTACC CGAGAGCGAA
AAGGCTGCTC AAGAGGTTCT TTCCCTACCC ATGCACCCCT TCCTGGAGGA TGCCCAGGTC
GAGCAGGTAA TCGAGACCGT ACGCCGTTTT TTCGCTGCCT GA
|
|---|
| Protein sequence | MLMIPIIDLQ REYQTLKTQI DAAVGRVLAS GSYIGGPEVS ALEAELSSYL SSPYVITVAS
GTDALFIALR AMGVGPGDEV ITTPFTFIAT VEAIQHAGAK PVLVDIDPQT FNLEPAHLES
ALSERTRAIL PVHLYGQPAP MREIRAFAQQ HRLLILEDAA QAIGARYCAV DREPGRMAGN
LGDAAGFSLY PTKNLGAYGD AGFITTSSPQ IAEEARLIAA HGSKMRYHHI RPAGYTSRLD
ALQAAILRVK LPYLESWNTR RRHIARLYDE GLKNLVETPY QAPYSYHIYH QYTVRTPERD
RLLAFLKENG VGSSVHYPLP AHLQPAYRDL APQGSLPESE KAAQEVLSLP MHPFLEDAQV
EQVIETVRRF FAA
|
|---|
| |