Gene Mesil_1392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMesil_1392 
Symbol 
ID9250891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus silvanus DSM 9946 
KingdomBacteria 
Replicon accessionNC_014212 
Strand
Start bp1378760 
End bp1379782 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content66% 
IMG OID 
Producttransport system permease protein 
Protein accessionYP_003684793 
Protein GI297565821 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.748601 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0461748 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTCT CCCCCGTCCA AAAACGCCAA AGCCGCTACC GGCGGGCCAT CTGGCTGGTC 
GGGGTGGCAT TGCCGGTAGT CCTGCTGCTA GCGGCGGGGA TCGGGGCTTA CTGGATTCCC
CCCCTCGAGG TTCCACGGGT GCTCTCGCAG AAGCTCGAGG GGTACGCGGT GTTGGTGGAG
ATCCGCTTCC CCAGGGTGCT TCTGGCCGCT CTGGTCGGGG CTACCCTGGC CCTTTCGGGA
GCGGTACTGC AAGGGATGTT CCGCAACCCC CTGGCCGACC CTGGCTTGAT CGGGGTGAGC
GCCGGGGCCG GGTTTGGCGC CGCTTTGTGG ATCGTGCTCT TCGGGGCGCT AGGCTGGAGC
TACCTGGGCT TGCCGCTAGC GGCTTTTTGG GGTGGGCTCT TCACCGTGGC CTTGGTGTGG
CGGGTAGCCC AGAGCGGCCC TCGGGTGCAC ACCGCTACCT TGCTGCTGGC GGGGATCGCG
CTTAACAGCG TTTCCGGGGC AGCCATCGGG CTCTTGCTGT TCCTGGCCGA CGACCAACAG
CTACGCAGCA TCGCTTTCTG GACCCTGGGC GGCTTCGGCG GGACTAACTG GTCGCTGCTG
GCCCTGACGG CTCCTTTCAT GCTCATCGCC ATTTTCGGGT TGTTGCGGCT GGCCAAACCC
CTCAACGCAC TGGTGCTGGG TGAGGGGGAG GCGTACCACC TGGGGGTTTC GGTGGAGCGG
ATGAAGCGCC AAGCCATCGC CCTTACCGCG CTCGGGGTGG GGGCAGCGGT AGCGGCCGCC
GGAGGGATCG GCTTCGTGGG GCTGGTGGTG CCGCACCTAT TCCGTCTTTT CGCCGGGCCG
GATCACCGCT ACCTGCTGGT GGGCTCGGCG CTGGGCGGGG CGGTGCTCAG CGTGTTGGCC
GATTTGATCT CGCGCACCGT GGTGGCTCCA GCGGAGCTTC CGGTAGGGGT CATCACTGCC
CTGGTGGGGG GGCCTTTTTT CCTGTGGCTC TTGCTGCGGT ATAAGAAGGA GACCTATGCC
TGA
 
Protein sequence
MTLSPVQKRQ SRYRRAIWLV GVALPVVLLL AAGIGAYWIP PLEVPRVLSQ KLEGYAVLVE 
IRFPRVLLAA LVGATLALSG AVLQGMFRNP LADPGLIGVS AGAGFGAALW IVLFGALGWS
YLGLPLAAFW GGLFTVALVW RVAQSGPRVH TATLLLAGIA LNSVSGAAIG LLLFLADDQQ
LRSIAFWTLG GFGGTNWSLL ALTAPFMLIA IFGLLRLAKP LNALVLGEGE AYHLGVSVER
MKRQAIALTA LGVGAAVAAA GGIGFVGLVV PHLFRLFAGP DHRYLLVGSA LGGAVLSVLA
DLISRTVVAP AELPVGVITA LVGGPFFLWL LLRYKKETYA