| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mesil_1336 |
|---|
| Symbol | |
|---|
| ID | 9250832 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus silvanus DSM 9946 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014212 |
|---|
| Strand | - |
|---|
| Start bp | 1321456 |
|---|
| End bp | 1322595 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | type IV pilus assembly protein PilM |
|---|
| Protein accession | YP_003684737 |
|---|
| Protein GI | 297565765 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.384487 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.906324 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGAGAGC TATTAAGCAG CTTGTTACGG CCACGGGTCG AGGCATTGGG CCTCGAGATC
GGTTCGGCCA ACCTCAAGCT GGTGGAGCTA TCCGGCTACC CTCCCACCCT CCGCGGTTTG
GCCATCCGTC CTACACCGCC AGGCACCATC CAGGACGGAG CCATCGTGGA GCCGGGGGTA
TTGGCCGGGG AGTTGCGCGA TATGCTGGGC GAGTTACGCA CCCGCAAACG CTACGTGGTG
GCTGCCGCCA GCAACCTGGC CGTGATCACC CGTACCATCC AGGTGCCCAA GATGCTGCCC
AAGCAGCTCG AGGAGGCCGT GCGCTGGGAA GCCGAGCGGT ACATCCCTTT CCCCATTGAC
GAGGTGGTGC TGGACTTTGC TCCTTTGGAT GATCCAGAGA CCATCGCAGA CGGGGAGCAG
ATGGAAGTAG TAGTCGGGGC AGCCCGCCAG GAAACGGTAG CGGGATTGGT TGAGGCCATC
AAGGCCGCGG GGCTCGAGCC CTTGGTCATC GATGTAAAAC CTTTCGCCGG GCTCAGGCCG
ATGGAGCACC AGCTCAAAGG CGAGAACGGG CAGGCCCCGG TAACGCTCTT CCTGGAGGTC
GGGGCCGAGT CCAGCGCCCT AGTGCTAACC CGGGGCGAGC GGCTCTTGCT AAACCGCATC
ATCAACCTCT CCGGCAAGGA CTTCACCGCC GCCATCGGGC GGGCTTTCAA CTTGGACCCA
GTGGCTGCCG AGGAAGCCAA GAAGAGCTAC GGCCTGGCCA CCATCCCCAC CGAAGATGAA
GAACTCCTCT TAGACTTCGA TGCCGAGCGC GAGCGCTTCA ACCCAGCCCG CATGTACGAC
GCCATTCGTC CGGTGCTGGT AGAGCTCACC ACCGAGCTAA GGCGTAGCCT GGAGTTCTTC
CGGGTGCAAG TGGGCGACCT GGGCATCGAG CAGGGCTTTG TGGCCGGGGG GGGCAGCAAG
CTGCGCGGGC TGGTTCCGCT GCTATCGGAC ACCTTGGGAA TCCCGCTCGA GCCCGCCGAC
CCCTGGCAAA ACATCTCCTT CGACAAAAAC CGCTTTGATG GGGACTACCT GCGTAGCCTG
GCCCCCGAGT TCACCGTCCC GCTAGGGCTG GCTTTACGGG GGGTGAACCC GCTTGATTAG
|
|---|
| Protein sequence | MRELLSSLLR PRVEALGLEI GSANLKLVEL SGYPPTLRGL AIRPTPPGTI QDGAIVEPGV
LAGELRDMLG ELRTRKRYVV AAASNLAVIT RTIQVPKMLP KQLEEAVRWE AERYIPFPID
EVVLDFAPLD DPETIADGEQ MEVVVGAARQ ETVAGLVEAI KAAGLEPLVI DVKPFAGLRP
MEHQLKGENG QAPVTLFLEV GAESSALVLT RGERLLLNRI INLSGKDFTA AIGRAFNLDP
VAAEEAKKSY GLATIPTEDE ELLLDFDAER ERFNPARMYD AIRPVLVELT TELRRSLEFF
RVQVGDLGIE QGFVAGGGSK LRGLVPLLSD TLGIPLEPAD PWQNISFDKN RFDGDYLRSL
APEFTVPLGL ALRGVNPLD
|
|---|
| |