| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mesil_1167 |
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| Symbol | |
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| ID | 9250660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Meiothermus silvanus DSM 9946 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014212 |
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| Strand | - |
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| Start bp | 1157332 |
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| End bp | 1159062 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003684574 |
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| Protein GI | 297565602 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.823071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.49953 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTATC ACGACTGGGA ACCCTTTTGC GTCAGCCCTA TGACCCCCGA GCTGGGCGCC
GAGGTGACCC TACGGGTGCG GACCTCGGCC AAGGCCGGGG TGTTGCTCCT CGAGCGCTTT
GGTGAGGTGG AGCGCAGGCC GCTGCAGGCA GTCCCGGATG GGCTGGAGAT CACCCTGCCC
ATGCATGCTT CTCCCATCCG CTACTGCTTT TTTCTCCCCG AGGAGAAAGT CTACCTCACC
AGCGGCGGGC CCTCGAGCAC CATGCCCCGC TACGACCGCT TCTTTCACTT GCTTTCGGCC
CCCAGCGTGC CGGAGTGGGC GGTGGGGGCG GTGTTTTACC AGATCTTCCC GGACCGCTTC
AAAAACGGCG ATCCCTCCAA CGACCCCAAA GACGGCGAGT GGATCTACAT GGGCCAGAAG
ATCGTGAAGA AGGCATGGGA CGATCCGGTA GACCTCAAGA TCGGGCCGTT GCAACACTAC
GGGGGCGACC TCGAGGGCAT CCGCCAGGCC TTGGGTTACC TCCAGGAGTT AGGCATCGAA
GCGCTCTACC TCACCCCTAT CCTGCCCAGC CGCTCCAACC ACCGCTACGA CGGGCTGGAT
TACCTCAACG TGGACCCCTA CTTGGGCGGC AACGAAGCTT TTGATAGGCT GGTCGCCGAC
CTCCACGCCC ACGGCCTGAA AATCGTGCTG GACGGGGTGT TCAACCACAT AGGCGACGCC
CATCCGGACT TTCAGAAAGC CCTGCACGAC CCCGATTCGC CCGAAGCCAG CCAATTCACT
TTCCACGCCG ACGGCAGCTA CGCCTCTTTC ATGGGGGTCA AGACCCTGCC CAAGCTCGAC
TATGCCAGCC CGCTGGCAGT AGAGCGCTGG CTCGATGGCT ACCACGCTCC GGTGCGCCAC
TGGCTGCGCA AAGGCGCCGA TGGCTGGCGG CTGGACGTGG CCCACCAGAT CGGGGAGGGT
GGAACGGACC GGCACAACCT CGAGCTGCTC CGCCTCATCC ACCGCAACAG CCGCGAGGAA
AACCCTGAGG CCTTCGTGTT CGGGGAGCTT TTCTTTGACT CCACGAACCA CCTCCGAGCC
CACACTCTGG ATGGTTCGAT GCACTACCAC GGCTTTGCCA ACCCGCTGCT CGAGTGGCTC
AGCGGCAGGA ACATCTACGG TTGGGAGGTA GAGGTGAGCG CTTCAGAGGC CTGGCAGACC
CTCTGGGACC ACTACGCCGC GCTACCCTTG CAGATCCGCC AGACCATGTA TACCCTCCTC
GACAGCCACG ACGTACCCCG GGCCTTCTGG CGGTTGCGGG GAGACGTTGA GCTATACAAG
ATGGCTCTGG GCATTTTGCT CACCTTCCCC GGCGCGCCCG GCCTGTACTA CGGCAACGAA
ATCGCCCTCA ACCAGAGCAA CCCCTACGAG GTCTGGAACG GCGACCCGAT GTGCCGGGGA
AGTTTCCCCT GGGACGAGTC GAAATGGAAC CGGGAGGTGC TCGAGTGGAC TCGGCGGCTC
ATCCACCTGC GCAAGAACAC CCCTGCTTTG CGCCGGGGCG GGCTCCTGCC GCTCCAGGCC
CCCACCGGCG CGATCGCCTA CAAACGGGTC TACCAGGGCC AGGAGGTCTG GGTGTACGCG
GCTCCCACCC CGGTGCGCCT CGAGCTGCCG CCCAGCCAAA ACCTCTTAAG CGGGGAAAAG
ATGGGCGGAA GAGCCGTGGT CCACGGTTTA GGAGTTTTCC AGATTACTTA A
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| Protein sequence | MHYHDWEPFC VSPMTPELGA EVTLRVRTSA KAGVLLLERF GEVERRPLQA VPDGLEITLP
MHASPIRYCF FLPEEKVYLT SGGPSSTMPR YDRFFHLLSA PSVPEWAVGA VFYQIFPDRF
KNGDPSNDPK DGEWIYMGQK IVKKAWDDPV DLKIGPLQHY GGDLEGIRQA LGYLQELGIE
ALYLTPILPS RSNHRYDGLD YLNVDPYLGG NEAFDRLVAD LHAHGLKIVL DGVFNHIGDA
HPDFQKALHD PDSPEASQFT FHADGSYASF MGVKTLPKLD YASPLAVERW LDGYHAPVRH
WLRKGADGWR LDVAHQIGEG GTDRHNLELL RLIHRNSREE NPEAFVFGEL FFDSTNHLRA
HTLDGSMHYH GFANPLLEWL SGRNIYGWEV EVSASEAWQT LWDHYAALPL QIRQTMYTLL
DSHDVPRAFW RLRGDVELYK MALGILLTFP GAPGLYYGNE IALNQSNPYE VWNGDPMCRG
SFPWDESKWN REVLEWTRRL IHLRKNTPAL RRGGLLPLQA PTGAIAYKRV YQGQEVWVYA
APTPVRLELP PSQNLLSGEK MGGRAVVHGL GVFQIT
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