| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mesil_1104 |
|---|
| Symbol | |
|---|
| ID | 9250597 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus silvanus DSM 9946 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014212 |
|---|
| Strand | - |
|---|
| Start bp | 1093722 |
|---|
| End bp | 1095527 |
|---|
| Gene Length | 1806 bp |
|---|
| Protein Length | 601 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | Endonuclease/exonuclease/phosphatase |
|---|
| Protein accession | YP_003684517 |
|---|
| Protein GI | 297565545 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.604194 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAATA TTTGTGGAAA AGTTTCAAAA TGGTGGATCG CTTTGTTTTT GCTCATGGCG
CCTGGCCAGC AAAGCCCCTC TGCTCAAGGG TGGGGCATGG CCGTAGCGGC CTCGCAGGGA
CAGGGCCAAG CGGCTTCCTG TCCGGCAGAT TCCGGCGTAA TACGTACCTT TCAGATAGAA
GGTAGGGGAG CCTCGAGCCC CTTGGCGGGG CAAGTGGTGA CCACCGAAGG GGTAGTGGTG
GGCGATTATC AAGAGCCAAA CCAGCTCCAG GGCTTCTTCC TCCAGGATCT TACCGGGGAC
GGTGACCCCG AGACCTCGGA CGGCCTGTTC GTCTATACCC CTTCAGGCTT CGCGGTGAAC
GCGGGGGATT ACGTGCGGGT CACCGGCAAG GTACGCGAGT ATGCCTCCCC AGGGGATACC
CGAGGCACCC TAACCGAACT CGAGGAGGTA CGTAGCGTCC TGGTGTGCGC TACCGGGGTC
GCCGTGGGCC CCACCCCGGT AACCCTACCC CTTGCGAGTA CGGGCGACCT CGAGCGCTAT
GAGGGGATGC TGGTGAGCTT TTCCCAAACC CTCACCGTCA GCGAGGTGTA TAACCTGGGC
CGCTTTGGGG AGATCAGCCT TTCGGCAGGC GGGAGGCTGT TCCATCCCAA CAACGGCAAC
GCCCTGGGCG AGGCGGCAAT GGGCAATCCC TTGCGGCGCA TCCTGCTGGA TGATGGCAGC
AACGTGCAAA ACCCTCGCCC AATCCCCTAC CTTTCGGCAG CGGATACCTC GGGCACCCGG
CGGGTCGGGG ACAGCGTGGT AGGGCTCACC GGGGTCCTCT CTTACGGCTT CTCCAGCTAC
CGAGTAGAGC CGGTGGGCAC AGTCAACTTT ATCCCTAGCA ACCCCCGGCC CGAGGCCCCC
GAAGACGTCG GTGGCTCCCT CAGGGTGGCC AGCTACAACG TGCTCAACTA CTTCACCACC
CTAGGCGCAC GGGGTGCTAG CAACCAGGCC GAACTCGAGC GGCAAAGGGC CAAGCTGGTA
GCCGCCCTGC GCGCTCTGGA CGCCGATATA GTGGGACTGA TCGAGATACA AAATAATGGC
GACGCTGCGC TCGAGGACCT CGTTCGGGCA CTCAACACAG CGCTGGGCAG CGATGCCTAC
GCCGCCCTAG CGACCGGCAG CCTCGGCACC GATCAGATCA AGGTAGCCCT GATCTACAAA
CCTGCTCGGG TCAGGCCGGA AGGAGCATTC CGCATCGACG ATGACCCTAT CTTCTCCCGC
CCTCCGCTCG CCCAAACCTT CCGCGACCGG GCCACCGGTG GACGCTTTAG CGTGGTGGTC
AACCACTTCA AGTCCAAGGG CTGCGAGGGG GCCAGCGGGG CCGAAACAGA CACCGGTCAA
GGGTGTTGGA ACGCCCTGCG CGTACGACAA GCCCAGCGAC TTTTGACCTT CATCAACGAC
CTCCGGGCCA CCGACCCCGA CGTGCTGGTG GTAGGTGACC TCAACGCTTA CGCCGAGGAG
GACCCGCTGA AGGTGCTGAC CGGGGCCGGA TTGGAAAACC TGATCCTGCA CATCTCCGCG
GCCAAACGTT ACAGCTACGT GTTCAACGGG GAGTCCGGCA ATCTCGACCA CGCCCTGGCG
ACCTCCAGCC TCTCTTCGCA AGTTACCGGG ATCACCGAGT GGCACATCAA CGCCGACGAG
CCCAGGGTGC TCGATTACAA CACCGAGTTC AAACCCGATG ACCGCTACGC CCCCACCCCC
TTCCGCTCCT CCGATCACGA CCCGCTGCTG GTCGGGCTGA ACCTGCGCGC CGACCCCGAG
CCCTGA
|
|---|
| Protein sequence | MQNICGKVSK WWIALFLLMA PGQQSPSAQG WGMAVAASQG QGQAASCPAD SGVIRTFQIE
GRGASSPLAG QVVTTEGVVV GDYQEPNQLQ GFFLQDLTGD GDPETSDGLF VYTPSGFAVN
AGDYVRVTGK VREYASPGDT RGTLTELEEV RSVLVCATGV AVGPTPVTLP LASTGDLERY
EGMLVSFSQT LTVSEVYNLG RFGEISLSAG GRLFHPNNGN ALGEAAMGNP LRRILLDDGS
NVQNPRPIPY LSAADTSGTR RVGDSVVGLT GVLSYGFSSY RVEPVGTVNF IPSNPRPEAP
EDVGGSLRVA SYNVLNYFTT LGARGASNQA ELERQRAKLV AALRALDADI VGLIEIQNNG
DAALEDLVRA LNTALGSDAY AALATGSLGT DQIKVALIYK PARVRPEGAF RIDDDPIFSR
PPLAQTFRDR ATGGRFSVVV NHFKSKGCEG ASGAETDTGQ GCWNALRVRQ AQRLLTFIND
LRATDPDVLV VGDLNAYAEE DPLKVLTGAG LENLILHISA AKRYSYVFNG ESGNLDHALA
TSSLSSQVTG ITEWHINADE PRVLDYNTEF KPDDRYAPTP FRSSDHDPLL VGLNLRADPE
P
|
|---|
| |