Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mesil_0701 |
Symbol | |
ID | 9250190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus silvanus DSM 9946 |
Kingdom | Bacteria |
Replicon accession | NC_014212 |
Strand | + |
Start bp | 691237 |
End bp | 691914 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | CRISPR-associated RAMP protein, Csm3 family |
Protein accession | YP_003684124 |
Protein GI | 297565152 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.490218 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00485389 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGACTAA TTGGTTACAA GCGCATTCAC GGCATTATCC GGCTCAAAAG CGGCCTGCGC ATCGGCATGA GCAAGGATCA GATGGCTATC GGGGATGTGG ACAACCCGGT GATCCGCAAC CCCCTCACCG AAGAGCCCTA CATCCCCGGC TCCTCGCTCA AGGGGAAGAT GCGGTATTTG CTCGAGTGGC ACCTAGGGGG TGACTATATT TCCCGCTCGA GCGAGAGACA TGTCTACGTG CCTGACGACC CGAAAGATCC GGTTGGGCGT ATCTTTGGTA GTGCGCCTAG TAACGAGGCC CAGCGCCGAA TTGCCCAAGA GCGCGGCCCC ACCCGCCTGC TGGTGCGCGA TGCTTACCTA ACCCCCAATT CCAAGCAGGC CCTCGAGCGC ATGACCGCCC GCGGCGGCTA CCTGACCGAG GTCAAGCAGG AGGTCTTCAT CCCCCGCATC GGCGGCAATG CCAACCCTCG CACTGCCGAG CGCGTGCCCG CAGGGGCCGA GTTCGCCTTT GAGATGGTCT ACCGGGTGAT GGACACCGGC GACGGCGGCC AGACCGACCG GGCGAACTTC CATCACGTTG AGAAGGCCCT GGAGCTTCTG CAACTCGATG GGCTGGGGGG CTACATCAGC CGGGGCTATG GGCAGGTAGA ACTCGACTAC CGGGTTGAGG AAAAATGA
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Protein sequence | MRLIGYKRIH GIIRLKSGLR IGMSKDQMAI GDVDNPVIRN PLTEEPYIPG SSLKGKMRYL LEWHLGGDYI SRSSERHVYV PDDPKDPVGR IFGSAPSNEA QRRIAQERGP TRLLVRDAYL TPNSKQALER MTARGGYLTE VKQEVFIPRI GGNANPRTAE RVPAGAEFAF EMVYRVMDTG DGGQTDRANF HHVEKALELL QLDGLGGYIS RGYGQVELDY RVEEK
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