| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mesil_0688 |
|---|
| Symbol | |
|---|
| ID | 9250177 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus silvanus DSM 9946 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014212 |
|---|
| Strand | + |
|---|
| Start bp | 674314 |
|---|
| End bp | 675258 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | periplasmic solute binding protein |
|---|
| Protein accession | YP_003684112 |
|---|
| Protein GI | 297565140 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000152738 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0354959 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGCGC TGCACCTCTG GGCGCTGGCC CTCGTCCTGC TGCTGAGCGC CTGCCAGGTC
CAGGACTTCG CCCTGCGGCC CATCGACGGC GACCGCCCGG TGCGGGCCGT GGCCACCGCC
AACTTCGTCA CCGACCTCGT GCAGCAGATC GGCGGGGAGC GGGTGCAGGT CACGGGCCTG
ATGGGCCCTG GCGTGGACCC CCACCTCTAC AAGGCCTCGG CCGGGGACGT GCGCAAGCTC
ACCCAGGCCG ACGTGGTGTT CTACAGCGGG CTGTTCCTCG AGGGCAAGAT GGTCGAGCTC
TTCGAGAAGA TGCCCAAGGC CATCGCCATC ACCGACGCCA TCCCCCACGA GCTGCTCATC
GCGCCGGAAG GCGGCTTCGA GGGCACCTAC ACCTACGACC CCCACGTCTG GTTCGACGTG
AGCCTGTGGG CCCACACCGC CGAGGCCGTG CGGGACGGGC TCTCCAAGGT GGACCCGGCA
GGCGCCGGCT ACTACGCCGA ACGCACCCGG CAGTACCAGG CCCGGCTGCA AGAGCTCGAC
GCCTGGGTCA AGCAGGAGAT CGGGCGCATC CCCCCCGCGC AGCGGGTGAT GGTGACCGCG
CACGACGCCT TCGGCTACTT CGGGCGGCGC TACGGGCTCG AGGTGCGCGG CCTGCAGGGC
GTCTCGACCG TGGCCGAGAC CGGCACCCGC GACGTGCAGG AGCTCGCGGC CTTCCTGGCC
GAGCGCGGCA TCCGGGCCAT CTTCGTCGAG TCGAGCGTGC CCCGGCGCTC GGTGGAGGCC
GTGGTGGCGG CGGTGCGGGC CCGGGGCAAG GAGCTGCGCA TCGGCGGCGA GCTCTTCTCC
GACGCGGCCG GCGACCCCGG CACCCCCGAA GGCACCTACG TCGGCATGGT CGAACACAAC
GTCAGAACCA TCGTTTCGGC TCTGCTCGGA GGCGAACACC CATGA
|
|---|
| Protein sequence | MKALHLWALA LVLLLSACQV QDFALRPIDG DRPVRAVATA NFVTDLVQQI GGERVQVTGL
MGPGVDPHLY KASAGDVRKL TQADVVFYSG LFLEGKMVEL FEKMPKAIAI TDAIPHELLI
APEGGFEGTY TYDPHVWFDV SLWAHTAEAV RDGLSKVDPA GAGYYAERTR QYQARLQELD
AWVKQEIGRI PPAQRVMVTA HDAFGYFGRR YGLEVRGLQG VSTVAETGTR DVQELAAFLA
ERGIRAIFVE SSVPRRSVEA VVAAVRARGK ELRIGGELFS DAAGDPGTPE GTYVGMVEHN
VRTIVSALLG GEHP
|
|---|
| |