Gene Mesil_0627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMesil_0627 
Symbol 
ID9250112 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus silvanus DSM 9946 
KingdomBacteria 
Replicon accessionNC_014212 
Strand
Start bp608507 
End bp610381 
Gene Length1875 bp 
Protein Length624 aa 
Translation table11 
GC content63% 
IMG OID 
Productprotoheme IX farnesyltransferase 
Protein accessionYP_003684055 
Protein GI297565083 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.234547 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCA GCCGATTTGC CTTCTACGCT TGGGTGACGC TGGTTGTCAC CTTGGGAGTC 
ATCCTTTGGG GCGATGTGGT GCAGGCCACG GGTTCGGGGG ATGGCTGTGG GGCCCACTGG
CCCACGTGCA ATGGGGATTT ATTGCCCCTA GCGCCAGGGG TAGCCACCTT TATCGAGTTC
TTCCACCGCG CCACCAGCGG GCTGGACTTT TTGCTGGTGG TGGGGCTTTT CCTCTGGTCC
CGGCGGGCTT TCCCGCAAGG TAACCCGGTG CGTTTGGGGT CTGGGGCGGC CCTGGCTTTC
ATGGTGGTGG AGAGCCTGGT GGGGGCTGGC TTGGTGCTCT TCCGCTTGGT GGGGCAGGAT
GCCAGCCTGG CTCGAGCCTT CGTGGCCCCG GTGCACCTGC TCAACACCTT GCTGCTCATC
GGCTCGTTGG CTCTAACCGC CTGGTGGGCC TCGGGTGGGG CTTTGCTGCG CTGGCGTGGC
CAGGGGGCGG TGGCCTGGGC CTTGGGGCTC GGGTTCGGTG GGCTGGCGGT GCTGGCCGCC
TCGGGCGCAG TGACCTCACT GGGGGATGCT ATTTTCCCCG TGCATAGCAC CGCTGAGGCC
GTCGGTCGGG CCATGACCCC CGGCGAGCAC TTCTTGGTGC GGCTAAGGGT ACTGCACCCC
TTTATCGCGG TGAGTGTGGG GCTTTACCTG GTGCTGGCGG CGGGCCTGAT CGCCTATCTG
CGGCCCAGCC TGGCAACCCG GCGGCTCTCC CGGTCGGTGG GAGTGCTCTA CTTGATTCAG
CTCGGCATGG GCTTTCTCAA CGTGTACTTC GCCGCTCCTC TGTTCACCCA GCTTCCCCAC
CTCCTGTTGG CCGACCTGTT ATGGATCAAC TGGGTGCTTT TGATGGCTGC GGCTTTAGCG
GCAGGGGCTC CTCGGCGGGA GATGAACGGG GAGGTGAGGC AAGACCCCGA AACTGGGTTA
AACTCAAGTG CGATGACTCC CCCTCCTGAG AGCGTATCCG TGCATGCCGG AACCGGCGGG
GCCACCTGGC GCGATTACCT CTGGCTCACC AAGCCCCGGG TGATCAGCTT GCTTTTGTTT
ACCACGTTGG CGGCCATGCT GATCGCCGCA GGCGGGTGGC CGGGCGGGTG GCTTTTCCTG
TGGGTGGCTG TTGGCGGATA CGCCATGGCC GGGGCGGCCA ACGCCATCAA CATGGTGATC
GACCGCGACA TCGACGCGCG GATGAACCGC ACCGCCAAGC GCCCCACCGT TACTCACAAG
ATATCCTCGC GAGACGCGCT GATCTTTGCC TCGGTATTGA TGGTGGGTGC TTTTGTTTTG
CTGTGGTGGG CCGCCAACCT GCTTACGGCC TTGCTGGCCC TCTCCGGGCT GTTGTGGTAC
GTGCTGGTCT ATACCCTCTA CATGAAGCGC CGGTACTGGA ACAACATCGT CATCGGTGGG
GCGGCGGGGG CTTTCCCTCC GCTGGTGGGT TGGGCCGCGG TCACCAATGA CCTTTCGCTC
TTTGCCATTT ACCTCTTTGC GATCATTTTC TTCTGGACCC CGGTGCATTT TTGGGCGCTT
TCCTTGCTGA TTAAAGACGA CTATGCCCGG GTGGGGGTGC CGATGCTCCC GGTGGTGCTG
GGCGAGCGGG TGACGGTGGT GCAGATCGGG CTGTATGCCA TCCTGACCAC GGTGATCTCG
CTGATCCCCT TGCTGATGGG CGAGCTGCGC ATGGTCTATC TGGTCTCGAG CCTGGTGCTG
AACGGGCTTT TGCTGGTGCG GAGTGTGCAG CTTTATCTCG AGCCCGTCCG TCCCAGGGCC
GTCTCGCTGT ACAAGTACTC CATGCTCTAC CTGGCCCTGC TCTTTGTAGC CATGGCGGTA
GACAGGTCGC TTTAG
 
Protein sequence
MKRSRFAFYA WVTLVVTLGV ILWGDVVQAT GSGDGCGAHW PTCNGDLLPL APGVATFIEF 
FHRATSGLDF LLVVGLFLWS RRAFPQGNPV RLGSGAALAF MVVESLVGAG LVLFRLVGQD
ASLARAFVAP VHLLNTLLLI GSLALTAWWA SGGALLRWRG QGAVAWALGL GFGGLAVLAA
SGAVTSLGDA IFPVHSTAEA VGRAMTPGEH FLVRLRVLHP FIAVSVGLYL VLAAGLIAYL
RPSLATRRLS RSVGVLYLIQ LGMGFLNVYF AAPLFTQLPH LLLADLLWIN WVLLMAAALA
AGAPRREMNG EVRQDPETGL NSSAMTPPPE SVSVHAGTGG ATWRDYLWLT KPRVISLLLF
TTLAAMLIAA GGWPGGWLFL WVAVGGYAMA GAANAINMVI DRDIDARMNR TAKRPTVTHK
ISSRDALIFA SVLMVGAFVL LWWAANLLTA LLALSGLLWY VLVYTLYMKR RYWNNIVIGG
AAGAFPPLVG WAAVTNDLSL FAIYLFAIIF FWTPVHFWAL SLLIKDDYAR VGVPMLPVVL
GERVTVVQIG LYAILTTVIS LIPLLMGELR MVYLVSSLVL NGLLLVRSVQ LYLEPVRPRA
VSLYKYSMLY LALLFVAMAV DRSL