Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mesil_0621 |
Symbol | |
ID | 9250106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus silvanus DSM 9946 |
Kingdom | Bacteria |
Replicon accession | NC_014212 |
Strand | - |
Start bp | 603206 |
End bp | 605104 |
Gene Length | 1899 bp |
Protein Length | 632 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | Phosphoenolpyruvate carboxykinase (GTP) |
Protein accession | YP_003684049 |
Protein GI | 297565077 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.655459 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.629684 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTGTCA AACACCCCCT GACACCCGTT AGAGTTAAGG GCGATATGAG TAACATCGAG TTCCCTAGCT ATATCCGTAG CCCTCGAGCC AAGCAGTGGA TTAGCGAGAT GGTTACCCTC TGTAAGCCCG ATGCGGTTCA TTTCTGCGAC GGCTCCGATG AGGAGTATAA CGCCCTGTGT GAGCAGTTGG TGGAAAGCGG GACCTTTATC CGGCTCAACC CCGAGTTACG GCCCAACAGT TTCCTGGCCC GCTCCGACCC CTCCGACGTG GCCCGCGTAG AAGACCGCAC CTTCATCTGC AGCCTCAACA AGGAAGATGC CGGACCTACC AACAACTGGG TCAACCCTCG CGAGATGCAC GAAACACTGC AAAGGCTCTT CGACGGCTGC ATGCGGGGCC GCACCATGTA CATCGTGCCT TTCTCGATGG GGCCGCTGGG CTCACCCATC AGCCACATCG GCATCGAGAT CACCGATTCG GCCTATGTGG TGGTCAACAT GAAGATCATG ACCCGCATGG GCCAACAGGT CTTTGAGGTG CTGGGCGAAA GCGACCAATT CGTCCCTTGT ATGCACAGCG TCGGCATGCC TTTGGAGCCC GGCCAGAAGG ATGTACCTTG GCCCTGCAAC CCTACCACTA AGTACATCGT GCACTTCCCC GAGGAGCGCA GCATCTGGAG CTATGGCTCA GGGTATGGCG GAAACGCCCT CTTGGGTAAG AAGTGCCTGG CCTTGCGCAT CGCCAGCGTG ATCGGGCGCG ACGAGGGCTG GCTGGCTGAG CACATGCTAA TCCTGGGGGT GCAGGATCCC AAGGGCAAAA AGACCTACGT GGCGGCAGCT TTCCCCTCCG CCTGCGGCAA GACCAACTTC GCCATGTTGA TCCCCCCCAA ACCCTTCCAA GAAGACGGCT GGAAGGTGAC TACGGTGGGC GACGACATCG CTTGGATTAA GCCCGGTCCC GACGGCCGCC TGTATGCCAT CAACCCCGAA GCCGGGTATT TCGGGGTGGC TCCGGGCACT TCTTGGAAGA CCAATCCCAA CGCCATGGAG ACCATACGGG CCAACACCAT CTTCACCAAC GTCGCCCTTA CCCCCGAGGG GGATGTGTGG TGGGAAGGGA TGGATGGCCC GCCGCCTGCC AAAGCCATTG ACTGGCAGGG CAAGGAGTGG ACCCCCGACT CCGGGCGCAA GGCTGCTCAC CCCAACGCCC GCTTCACCGC CCCCGCCAGC CAGAACCCGG TCATCGACCC GGAGTGGGAA AATCCCAACG GGGTGCCCAT CAAGGCGTTT ATCTTCGGCG GGCGACGGGC TACGGTAGTG CCCTTGGTCT ACCAGAGCTT CAACTGGTCC TTCGGGGTGT ACCTGGGGGC CACTATGGGC TCGGAGACCA CCGCAGCGGC CTTTGGGCAG ATCGGGGAGG TACGCCGCGA CCCCTTCGCT ATGCTGCCTT TCATCGGCTA TCATATGGCC AGCTACTTCA ATCACTGGCT GGACATGGGC CGCCGGGTGG TGGATCCGCC CCGCATCTTC AGCGTCAACT GGTTCCGCAA GGACAAAGAC GGCAACTACC TCTGGCCCGG CTACGGCGAG AACATGCGGG TGCTGAAGTG GATCGTGGAC CGGGCCAATG GCCGGGGCTA TGCCACGGAG AGCCCTCTGG GCTACGTGCC GCACTACGAA GACCTGGATT GGCGCGGGCT GGACTTCTCC AAAGAGAAGT TCCAGGAGCT CATGGCCATC GACCGCGAGC TCTGGCTCAG GGAGATCCTC TCCCACGAAG AGCTCTTCAT CAAGCTCTAC GAGCGCATGC CTAAGGAGTT CCTGGCCATG CGTGAGCTGC TGATCTCCAA CCTCTGGCGC TCGCCCGAGC ACTGGGATGT GGGGGAATAC AACTCCTAA
|
Protein sequence | MAVKHPLTPV RVKGDMSNIE FPSYIRSPRA KQWISEMVTL CKPDAVHFCD GSDEEYNALC EQLVESGTFI RLNPELRPNS FLARSDPSDV ARVEDRTFIC SLNKEDAGPT NNWVNPREMH ETLQRLFDGC MRGRTMYIVP FSMGPLGSPI SHIGIEITDS AYVVVNMKIM TRMGQQVFEV LGESDQFVPC MHSVGMPLEP GQKDVPWPCN PTTKYIVHFP EERSIWSYGS GYGGNALLGK KCLALRIASV IGRDEGWLAE HMLILGVQDP KGKKTYVAAA FPSACGKTNF AMLIPPKPFQ EDGWKVTTVG DDIAWIKPGP DGRLYAINPE AGYFGVAPGT SWKTNPNAME TIRANTIFTN VALTPEGDVW WEGMDGPPPA KAIDWQGKEW TPDSGRKAAH PNARFTAPAS QNPVIDPEWE NPNGVPIKAF IFGGRRATVV PLVYQSFNWS FGVYLGATMG SETTAAAFGQ IGEVRRDPFA MLPFIGYHMA SYFNHWLDMG RRVVDPPRIF SVNWFRKDKD GNYLWPGYGE NMRVLKWIVD RANGRGYATE SPLGYVPHYE DLDWRGLDFS KEKFQELMAI DRELWLREIL SHEELFIKLY ERMPKEFLAM RELLISNLWR SPEHWDVGEY NS
|
| |