Gene Mesil_0125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMesil_0125 
Symbol 
ID9249602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus silvanus DSM 9946 
KingdomBacteria 
Replicon accessionNC_014212 
Strand
Start bp131646 
End bp132923 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content65% 
IMG OID 
Product3-phosphoshikimate 1-carboxyvinyltransferase 
Protein accessionYP_003683578 
Protein GI297564606 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.769684 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCGGC ACCTCTTCCC CACCCGCTCC TTGCGCGGCA GCCTCCGGGT TCCCGGCGAC 
AAATCGGTGA CCCACCGCGG CCTGATGCTT GGCGCTCTGG CCCAAGGCGA AAGCTGGCTG
TACCACCCCC TCAAAGCCGG GGATACTCTC TCCACGGCGG GCGTTATGCG CGCTCTGGGG
GCAGAAATCC ACGAGGAGGG CGCGCATTTT CGCATCCGGG GGGTGGGTCT GGCGCTCAAA
GAGCCCGGCG ACATCCTAGA TTGCGGCAAC GCCGGGACGC TGATCCGACT GGTGAGCGGG
CTGCTCGCGG GGCAGGAGAT GTTCACGGTG CTCACCGGAG ATGCTTCTTT GCGGCGCCGC
CCGATGGGCC GGGTGACAGC CCCACTACGC CAGATGGGGG CCCGGATTGA TGGGCGCGAC
GGCGGGAGAC TCGCCCCCTT AGCGATTCGG GGCGGGGGGC TCAAAGGCAT CCGCTACGAA
TTACCCGTAG CGAGCGCCCA GGTCAAGAGT GCGGTCTTGC TGGCCGGGCT TTTCGCCGAG
GGGGAGACCG AGGTGACGGA GCCCGCCCCC ACCCGCGACC ATACCGAGCG TATCTTCCGG
CATTATGGGC TACCCATAGA AGTTCAGGGC AATCGCATCC GCACCCACCG CGCCCAGCCT
TTTGCGGCCC GCGACCTCAC CGTGCCGGGG GATTTCTCGA GCGCGGCTTT CTTTCTCGTG
GCCGCCCTCA TCACCCCGGA CTCCGAGGTG ACGCTCGAGG GGGTGGGGCT TAACCCCACC
CGCACCGGTC TTCTTACCGT ACTAAAGGAG ATGGGCGCGG ACCTTAGCTG GGAGGTCACC
GAAGGACAGG ATGGCGAGCC GGTGGGTTGG ATTCGGGCCA GGAGTTCGCA GCTCAAAGGG
GTAGCGGTGG ATCCCTCCTT GATCCCGCTA ATGGTAGACG AAATTCCGAT TCTTTCGGCC
GCCGCCGCCT GGGCAGAGGG CGAAACCTTC ATCCCGGGCC TGGAGGAACT GCGGGTCAAG
GAGTCGGACC GCCTCGAGGC CATCGCCAAG AACCTGAATA ACCTAGGGGT GAAGACCGAG
GTCGGGCCGG ATTGGATTCG GATTTTCGGC GGCAGTGTGC AACAAGGCCG CGTCGAACCC
TTTCACGACC ACCGCATCGC CATGGCCTTC GCGGTGTGTG GGTTGCAAAC TGGGGTCACG
GTGCACGACG CCGAGTGGGC CAGCATCTCC TTCCCTAGCT TCTGGGAAGA CCTGGATCGC
TTGCGCGGAA AGGATTGA
 
Protein sequence
MDRHLFPTRS LRGSLRVPGD KSVTHRGLML GALAQGESWL YHPLKAGDTL STAGVMRALG 
AEIHEEGAHF RIRGVGLALK EPGDILDCGN AGTLIRLVSG LLAGQEMFTV LTGDASLRRR
PMGRVTAPLR QMGARIDGRD GGRLAPLAIR GGGLKGIRYE LPVASAQVKS AVLLAGLFAE
GETEVTEPAP TRDHTERIFR HYGLPIEVQG NRIRTHRAQP FAARDLTVPG DFSSAAFFLV
AALITPDSEV TLEGVGLNPT RTGLLTVLKE MGADLSWEVT EGQDGEPVGW IRARSSQLKG
VAVDPSLIPL MVDEIPILSA AAAWAEGETF IPGLEELRVK ESDRLEAIAK NLNNLGVKTE
VGPDWIRIFG GSVQQGRVEP FHDHRIAMAF AVCGLQTGVT VHDAEWASIS FPSFWEDLDR
LRGKD