Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mesil_0103 |
Symbol | |
ID | 9249580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus silvanus DSM 9946 |
Kingdom | Bacteria |
Replicon accession | NC_014212 |
Strand | + |
Start bp | 104975 |
End bp | 106873 |
Gene Length | 1899 bp |
Protein Length | 632 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
Protein accession | YP_003683556 |
Protein GI | 297564584 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.199337 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTTTGGAA TCAACAAACG GGTCATCACC ATCATCTTTG GTTTCCTCGC CCTGGCATTT TTGGTGGGGG CAACCATCCT TTTCGCCCTG CAAGGAGGGG GCAATCTGAG CGGCAATCGC AGCCAAGGCC CCACCGTGAT GTGGGTCAAC GGTCGCCCGG TCAGCGAACT CGAGCTAGCC CGCATTCAGT CGCGCGACCC GCTGCTCTCG AGCAACCCCC AGGGGCTCAT GAAGCCGCTC TTGGATACTT TCTTCCTAGA GCAGGTAATC CTCACCAAAG CCGTGCAGCA AGACTCGAGC CGCATCCGGG TTTCCGGGGG GGAGGTGCGC AAAGCCCTCG ATGACCTCAA GCAGCGCGCC GGGGCTACCA CCAAGGAGCA ATACGACCAG CTTCTAAACC AGATCGGCTA CACCGACTCG CAACTGCGCG ACGAGCTGCG CGACAGCCTA AAGGTCCAAA AGCGGGTCGA GGAGATCCAA AAGAAAGCCA CCCCTACCCC CGAAGAGGTC AAATTTTACT TTGATCTGAA CAAGGCTAAC TACAAGACCG AAGACCGGGT CAAAGCCCGC CAGATCGTGG TGGACGACAA GAAACTGGCC GATGACCTCT ACGCCCAGCT CAAGGCCGGG GCCGACTTCG TCGAGCTAGC CAAAAAGAAC TCCAAGGTGG CCGCTGACCA GGGTGGAGCG CTAGGAGCCG AGACCGGCAA GAGCGAGCCC GGCTTCGTGA CCCGGGTGAT TTTCCCCAGC GAGGTGGCCG ATGCGGTCTT CAAGCTCAAG CAGGGCGGCC TCACTGCACC CATTGCCTCT GGGGGTCGTT ACTACATCGT GAAGGTCGAG GAATTCAAAC CCGGGGGCGA CCCCAACTTT GAGGAGGTCA AAGACCGCGT TGCCGAGGAT GTCAAGAAGA TCAAAGGCGA TCAGGCCCTA GAGGCATACC TCCTCGAGCT GCGCAAGAAA ACCCAGGTGC GCTTTGCCGA GAACACCACT TATAAGTACG AGAACCCGGT GGTAGCCAAA GTAGGTGAGA GCGAAATCAA GCTCCCCGAG CTGACTCAAT TGGTCTTCAC CAATCAGCAG ATTCCCCAGC TCATCCAGCA AGGCTTGGGC GATCTGGCGG TGCAGTTCTT TATGCCGCAG GCCCTCGAGC AGCTCATCAC CCGCGAGATT CTGGTGAGCG AAGCCAAGAA GATAAACCAG CCCTTCGTGG GGGCCCGAGA CCAAATCGCC CGCGAGGTTC AGGCTTATCA CACCAAGGAC ATCACCGTCA CCGACGAGGA GGTGCGCAAG TACTACGCCG AGAACCCGGC CTCCTTTACC ATTCCGGCCT CAGCGGAAGT GAAGGGAATA AGCTTCAAAA AGGAGGACGA AGCCAAGGCT AAGGCTTTCC GTGAGGCGGC TCTTAAAGGA GGCAAGCTCG AGGATTTGGC CAAGGCTAAC GGGGGCACCG TCACCGATTA CGGTAAGGTC AACCCCGGTA CCTTACCCCC GGTCGCCAAC CGCTTGGTGT TCCTCACCAA GGGGAACTTC CCCAAGGGGC CGCTGGGTGA GGTGAGCGAG GTAGTCAAGC TCGACGACGG TAGCTACCAG GTGCTCATCG TCAACAACCG GGTAGCCGAG AAGCTCAAGC CCTTTGAAGA GGTAGCCGAC CAGGCACGCG AGCAGGTATT GGCACAAAAG CGGAGCAAGG CGGCGCAAGC TTGGGTAGCC GAGTTGCGCA AGCAGACCAA GGTGGAGAAC AACCTCAACA AGGTGCTGGC CGAGATCACC CCTAAAGAGA CCAAGCCCGC CAGTTCCAAC CCTGGCTCAG GGCAGCAAAC CCCAGCCCAA TCCAGTCCGC AGAATAAAGC CCCTGCCCAA CCTAAGCAGG AGAACCCGAC CCCACCGAGC AAGCCCTGA
|
Protein sequence | MFGINKRVIT IIFGFLALAF LVGATILFAL QGGGNLSGNR SQGPTVMWVN GRPVSELELA RIQSRDPLLS SNPQGLMKPL LDTFFLEQVI LTKAVQQDSS RIRVSGGEVR KALDDLKQRA GATTKEQYDQ LLNQIGYTDS QLRDELRDSL KVQKRVEEIQ KKATPTPEEV KFYFDLNKAN YKTEDRVKAR QIVVDDKKLA DDLYAQLKAG ADFVELAKKN SKVAADQGGA LGAETGKSEP GFVTRVIFPS EVADAVFKLK QGGLTAPIAS GGRYYIVKVE EFKPGGDPNF EEVKDRVAED VKKIKGDQAL EAYLLELRKK TQVRFAENTT YKYENPVVAK VGESEIKLPE LTQLVFTNQQ IPQLIQQGLG DLAVQFFMPQ ALEQLITREI LVSEAKKINQ PFVGARDQIA REVQAYHTKD ITVTDEEVRK YYAENPASFT IPASAEVKGI SFKKEDEAKA KAFREAALKG GKLEDLAKAN GGTVTDYGKV NPGTLPPVAN RLVFLTKGNF PKGPLGEVSE VVKLDDGSYQ VLIVNNRVAE KLKPFEEVAD QAREQVLAQK RSKAAQAWVA ELRKQTKVEN NLNKVLAEIT PKETKPASSN PGSGQQTPAQ SSPQNKAPAQ PKQENPTPPS KP
|
| |