| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mesil_0020 |
|---|
| Symbol | |
|---|
| ID | 9249496 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus silvanus DSM 9946 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014212 |
|---|
| Strand | - |
|---|
| Start bp | 20980 |
|---|
| End bp | 22011 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | transposase IS4 family protein |
|---|
| Protein accession | YP_003683476 |
|---|
| Protein GI | 297564504 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.390946 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTTAGCC AAGCTTCTCC AAAGGGGGTG ATGCCCATGA ACCCACCGAA GTGCGATGAC
CTGGACTACA TCCACTTTCT CATCGCCGCT CAGCGGGTCT TCACCTGTAC CGAGGCCGCT
CGCTGTAGTC CAAAGGAGAA GAGCCCTCCC GCCCATGATG CCTTTACCCG CCTGCTGCAA
AGACAGCCGC CCGACACGGC GGCGCTGTGG CAGGAGGCCA AGGCCTTCGT GAAGCTCAGG
GAGGGGCTGC TGATCCTGGA CGACACCACC CTGGATAAGC CCTACGCTCG GGACATGGAT
CTGGTGAGTT ACCACTGGAG CGGCAAACAC CAAAGGGTGG TTAGGGGCAT CGCCCTCATG
ACCCTGCTGT GGACGGAGGG GCAGGCCCTG ATCCCCTGCG ACTTTCGGGT CTACGACAAG
CCCCAGGATG GGAAGAGCAA AAACGACCAC TTTCAGACCA TGCTCCAGAA AGCGAAGGAG
CGGGGGTTTC AGCCGGAATA TGTCCTGATG GACAGCTGGT ATGCCAGCTT GGAGAACCTC
AAGGCCATAG TCAGCTTTGG CTGGCGGTTT CTGACGCGGC TGAAGGGCAA CCGCCTGGTC
AACCCGGAGG GGAAGGGAAA TGTACCCATC CGTGAGGTGG AAATCCCTGG GGAGGGGAGG
GTGGTTCATC TTCGGGGTTT TGGGTTCGTG AGGGTGTTCC GAACGCTCTC CAAGGACGGG
GAGGCGGAGT ACTGGGCCAC GAACCATCTG GGGATGAGCG AAGAGAAGCG GGCGGAGTTA
GAGCGGCAAG GATGGGGGAT CGAAGTGTAC CATCGGGGGC TCAAGCAGTG CTGTGGGGTG
GAGCGGGCCC AGGTGAGGAA GGCGGTCTCC ATCCTGCGGC ACCTCCTCCT GGCTTTGCGG
GCCTTCCTCC GGCTGGAGGT CTACCGGCTG CGCAGGGGGG TGAGCTGGTA CGAGGCCAAG
GCGTCCATTG TTCGCGAGGC AATACGAAGT TATCTCGCCC ATCCCCTCCA CATCCTTCAG
CCAACTGCGT AA
|
|---|
| Protein sequence | MLSQASPKGV MPMNPPKCDD LDYIHFLIAA QRVFTCTEAA RCSPKEKSPP AHDAFTRLLQ
RQPPDTAALW QEAKAFVKLR EGLLILDDTT LDKPYARDMD LVSYHWSGKH QRVVRGIALM
TLLWTEGQAL IPCDFRVYDK PQDGKSKNDH FQTMLQKAKE RGFQPEYVLM DSWYASLENL
KAIVSFGWRF LTRLKGNRLV NPEGKGNVPI REVEIPGEGR VVHLRGFGFV RVFRTLSKDG
EAEYWATNHL GMSEEKRAEL ERQGWGIEVY HRGLKQCCGV ERAQVRKAVS ILRHLLLALR
AFLRLEVYRL RRGVSWYEAK ASIVREAIRS YLAHPLHILQ PTA
|
|---|
| |