Gene Ndas_5544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5544 
Symbol 
ID9249447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp739114 
End bp741048 
Gene Length1935 bp 
Protein Length644 aa 
Translation table11 
GC content78% 
IMG OID 
ProductMethylmalonyl-CoA mutase 
Protein accessionYP_003683429 
Protein GI297564456 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.11647 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTCC CTGAGAGCGG GGCCGCCGGA TCCGGCGCCC CCAACCCGGC CGACGGGTTC 
CCCGCCGCCA CACACGAGCG GTGGCGCGAA CTCGTGGCGG GGGTACTGCG CAAGAGCGGT
GTCCCCGAGG ACCGGCTCGC CGACACACCC GAGTCGGCAC TGGCCACGCA CACCTACGAC
GGGTTCGACA TCGAACCCCT CTACACCGGC GACCCCCCGG CCGCCGACCC CGGCTTCCCG
GGGCTGCCCC CCTTCACCCG GGGCCACCGG CCCGGCGGGT CGGTCCCCGA GGGCTGGGAC
ATCCGCGCCC GCCACACCGA CGCCGACCCG GACGTCCTGC GGCGGCGCCT GCACGCCGAC
CTCATGAACG GCGTCAGCTC GCTGTGGATC GCCGTCGGCG GCACCGGCCT GCCCGTCTCC
GCGCTCGGCC GGGCCCTCGG CGACGTCCAC CTCGACCTCG CGCCCGTGGT CCTGGACGCC
GGGGCCGACC ACGCCGACGC CGCCACCGCG CTGCTCGACG CCCACGCCGA CGCGGGCGTC
CCCGACGGCC GGATCATCTC CCACCTGGGC ATCGACCCCC TCGGCACCGC GGCCCTGGCC
GGCGAGCGCC CCGACGTCAT GGACCCCGCC CGCCTGGCCG CGGAGCTGGC CCGCGGGCGC
CCCGGCCTGG GGCTGTTCGT GGCCGACGGC CGCCTCGTGC ACAACGCGGG CGGCTCCGAC
GCCCAGGAAC TCGGCTTCGC CGTCGCCGCG GGGACCGCCT ACCTGCGCGC CCTGCACGCC
GCCGGGATGG ACCTGCCCGA CGCCGCGCGG CGCATCGAGT TCCGCCTGGC CGCGAACGCC
GACCAGTTCG GCGTCATCGC CAAGCTGCGC GCCGTCCGCG CCATGTGGGA CCAGGTCCTC
GACGCCAGCG GGGTGCCCGC CGACCAGCGC GCCATGCGCC TGCACGCCGC CACCTCCGAG
GCGATGATGA CCCGGCGCGA CCCCCACGTG AACATGCTGC GCACGACCGT GGCCTGCTTC
GCCGCCGGGG TCGGGGGAGC CGACGCGGTC ACCGTCGCCC CCTTCGACTC CGCCGTGGGC
CTGCCCGACG ACTTCGCCCG CCGCATCGCC CGCAACACCC AGTCCCTGCT CATCGAGGAG
TCCCACCTGG CGCGGGTCGT CGACCCCGCC GGAGGCTCCT TCTACGTCGA GGCGCTCACC
CGCGACCTGT ACCGGGCGGG CTGGGCGTTC TTCCGGGAAC TGGAGGCCGA GGGCGGGGCC
GCCGAGGCCG TCGAGCACGG CCTGCTGCGC GAGCGCGTGG ACGCGGTGTG GACGCGCCGC
CGCCTCGACC TCGCCCACCG GCGCTCCCCG CTCACCGGCG TCAGCGAGTT CCCCAACGCG
GACGAGGTCC CGCTGGTGCG GCCCGCCGAC CCCTCGCGGC CGCCGGCCCC GGTCCCCGGC
GGCTTCCCGG TGCGCCGCTA CGCCGACGAC TACGAGGCGC TGCGCGACCG CAGCGACGCC
CGCGCGGGCG ACACCGGCCG AAGGCCCACC GCCTTCCTGG CCACGCTGGG CCCGGTCGCC
GCGCACACGG CCCGCGCGTC CTTCGCGGCC AACCTGCTCG CCGCGGGCGG CGTCGCCTCC
CACGAACCCG GCCCGCTCGA CGGCGCCGCC GCCGTCGCGG AGGCGTTCGC CGCCTCGGGC
AGCCGCGTCG CCGTGCTCTG CTCCTCCGAC GCGGTCTACG CCGAGCAGGC CGAGGACGCC
GCGCGGGCGC TCAGGCGCGC GGGGGCCCTG CGGATCCTGC TCGCGGGCGC GCCCGACGAC
TCCTACCGCG AAGCCGGGGT CGACGCCTTC GCCCACCGGG GGTGCGACGC CGTCGCCCTC
CTCACCGACC TGGTCGACGT CCTGCTCACC GATCCGCCGG CACCGTCCGC CACTGCCGAG
GGGGCGCACG CATGA
 
Protein sequence
MDVPESGAAG SGAPNPADGF PAATHERWRE LVAGVLRKSG VPEDRLADTP ESALATHTYD 
GFDIEPLYTG DPPAADPGFP GLPPFTRGHR PGGSVPEGWD IRARHTDADP DVLRRRLHAD
LMNGVSSLWI AVGGTGLPVS ALGRALGDVH LDLAPVVLDA GADHADAATA LLDAHADAGV
PDGRIISHLG IDPLGTAALA GERPDVMDPA RLAAELARGR PGLGLFVADG RLVHNAGGSD
AQELGFAVAA GTAYLRALHA AGMDLPDAAR RIEFRLAANA DQFGVIAKLR AVRAMWDQVL
DASGVPADQR AMRLHAATSE AMMTRRDPHV NMLRTTVACF AAGVGGADAV TVAPFDSAVG
LPDDFARRIA RNTQSLLIEE SHLARVVDPA GGSFYVEALT RDLYRAGWAF FRELEAEGGA
AEAVEHGLLR ERVDAVWTRR RLDLAHRRSP LTGVSEFPNA DEVPLVRPAD PSRPPAPVPG
GFPVRRYADD YEALRDRSDA RAGDTGRRPT AFLATLGPVA AHTARASFAA NLLAAGGVAS
HEPGPLDGAA AVAEAFAASG SRVAVLCSSD AVYAEQAEDA ARALRRAGAL RILLAGAPDD
SYREAGVDAF AHRGCDAVAL LTDLVDVLLT DPPAPSATAE GAHA