Gene Ndas_5540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5540 
Symbol 
ID9249443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp735808 
End bp737046 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content74% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003683425 
Protein GI297564452 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.831749 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGTGC ACCACCCGTG GTGGATGAAC CCGGTCAACA CCCTGCTCAG ACCCTTCGAC 
AACAGCCTGG GGGCGGCCGA GGGCGCCTTC GACGCCATGC TGGCGGAGGC CTCCGCCAGC
AGCGGGCTCC CCTGGCCCTC CGACGAACCC TTCCTCTCGG ACACGCGCGT GCTCCACGAC
GCCTGGCAGG CGGTGCCCGG CGTCACCCCG ATCGGCCGGA TCGGCCTGCG GGGAGAGGTC
CGGCGGCGGC TGGAGACGCG CCTGCGCATG CTCCACCTGC TCGACGCCAA CCCGGAGGTC
GCGGCCCAGC CCGTCGAGCG GCCGGTGTTC ATCACCGGAC TGCCCAGGAC GGGCACGACG
TTCGGCCACG GCCTCCTGGC CCAGCACGTC CGGGCCCGCG CCCCGCGGCT GTGGGAGATG
CTGAGCCCGG TCCCCGACAC GGGCAGGCCC GGGGAGCGCA CCGTGGGCAG GCGCGAGCGC
CTCGCGCTGG CGCGGAGGCT GGTCCGGGGC ATGGACGCCA TGGGACCCGG GTTCCAGACC
ATCCACCCCA TGCACCCGCT CGAACCCGAG GAGTGCGTCT TCCTCCTGCC GCAGGGGATG
TTCTTCCACG TCCGCGCCGC CTCCCCGGAC TACCGCGCCT GGGTCGAGGG GCGCGACGCC
ACCCCCGACT ACGCCTACCT CAAACAGCAG CTCCAGGCGT TGCAGTGGAA GCGGCCCGCG
CGCCGCTGGG TGCTCAAGTC GCCCCTGCAC CTGCTCAGCC TGGACGCCCT GCTCAACGTC
TTCCCCGACG CGGTGGTCGT CATGACCGAC CGCGACCCGG CGCGGGCCAT GGCGTCGTGG
GCCAGCCTGA CCGAGACCTC GATGCGCATC CACAACAGCG ACGTGGACCC GCACTGGATC
GGCCGGGAGT GGCTGGGGAT CTGGGCGGCG GGAGCCGAAC GGGCCCGCCG CGTGCGCCGC
GAGCACGGTC CGGAACGCTT CCTGGACCTG CCCTACGGCG AGCTGACCTC CGACCCGCTC
GGGGCGGCCG AACGCGTCTG GAGCGGCCTC GGCGAGGACT TCGACCCCGA CACCCGGGCC
CGCACGCTCG CCTACACGCG CGCGGACCGG CGCAGGAACC CGGGCGGCCA CCGGTACGAC
CTGGAGTACT ACGGCCTCAC CGCCGAGGAG GTGCACGCGG CGTTCGGCCC GGACCCGACC
GGCGCCGAGG CGGCCCGCGC GGGAGGAGGC GGGACCTGA
 
Protein sequence
MNVHHPWWMN PVNTLLRPFD NSLGAAEGAF DAMLAEASAS SGLPWPSDEP FLSDTRVLHD 
AWQAVPGVTP IGRIGLRGEV RRRLETRLRM LHLLDANPEV AAQPVERPVF ITGLPRTGTT
FGHGLLAQHV RARAPRLWEM LSPVPDTGRP GERTVGRRER LALARRLVRG MDAMGPGFQT
IHPMHPLEPE ECVFLLPQGM FFHVRAASPD YRAWVEGRDA TPDYAYLKQQ LQALQWKRPA
RRWVLKSPLH LLSLDALLNV FPDAVVVMTD RDPARAMASW ASLTETSMRI HNSDVDPHWI
GREWLGIWAA GAERARRVRR EHGPERFLDL PYGELTSDPL GAAERVWSGL GEDFDPDTRA
RTLAYTRADR RRNPGGHRYD LEYYGLTAEE VHAAFGPDPT GAEAARAGGG GT