Gene Ndas_5488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5488 
Symbol 
ID9249391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand+ 
Start bp683150 
End bp683806 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content75% 
IMG OID 
ProductMethyltransferase type 12 
Protein accessionYP_003683373 
Protein GI297564400 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.254106 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGTG AACACGCGGC GGACTCCCTG CCCGAGGAGA TGGGCGAGGA CTTCTGGAAC 
GAGCGCTACC GCTCACAGGA ACGGATCTGG AGCGGCAGGC CCAACCGCCA CCTGGTGGCC 
GAGGCGGCCG ACCTCGAACC CGGACGGGCG CTGGACGTGG GCAGCGGCGA GGGCGCCGAC 
GCGATCTGGC TGGCCGAACG CGGCTGGCGG GTGACCGCGC TCGACATCTC GACCGTGGCG 
CTGGACAGGG GCGCCGCCCA CGCCCGAGAG CGGGGCGGGG AGGTGCCCGG GCGCATCACC 
TGGAAGCGGG CGGACGTGAC CCGCTGGTCC CCGGACGAGG ACGCGTTCGA CCTGGTGACC 
TCGCAGTTCA TGCACCTGCG CGAGCGCTGG CGCGCCCGGT TCTTCGCCGC GCTGGCCTCG 
GCGGTCGCGC CCGGGGGAGA ACTCCTGGTC GTCGCGCACC ACCCCCGGGA CCTGGAGGAG 
GGCGTGCCCC GCCCGCCGGA CCCGGACCTG TTCTACACGG GCGACGAGGT GGCGGCGGCC 
CTGCCCCGGG AGGAGTGGAC CGTGCTCGCC GACGAGGTCC GCGCGGGGAC GGCCGTCCTG 
GACGGGGAGA CCCACACCGT CCACGACCTG GTGGTCCGCG CCCGCCGCGA GGCCTGA
 
Protein sequence
MTGEHAADSL PEEMGEDFWN ERYRSQERIW SGRPNRHLVA EAADLEPGRA LDVGSGEGAD 
AIWLAERGWR VTALDISTVA LDRGAAHARE RGGEVPGRIT WKRADVTRWS PDEDAFDLVT 
SQFMHLRERW RARFFAALAS AVAPGGELLV VAHHPRDLEE GVPRPPDPDL FYTGDEVAAA 
LPREEWTVLA DEVRAGTAVL DGETHTVHDL VVRARREA