| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_5463 |
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| Symbol | |
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| ID | 9249366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014211 |
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| Strand | + |
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| Start bp | 651604 |
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| End bp | 652866 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | |
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| Product | putative RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003683348 |
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| Protein GI | 297564375 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.37967 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCCACA CCGACGCCAC GCGCGCGGTC GAGGCGGTCT GGCGTATCGA GTCGGCCCGT
CTCGTCGCAG CGCTCACCCG CATGGTCGGC GACGTCGGCC TCGCCGAGGA GTTCGCCCAG
GACGCGCTGG TCAGCGCACT GGAGAAGTGG CCCGGCGACG GGGTTCCCGA CAACCCCGGC
GCCTGGCTGA CCACCGTCGC CAAGCGCCGC GTGCTCGACC GCTGGCGCCG CGACGAGCGC
TTCCAGCGGC GCATGGCCGA CCTCGGCCGC GAGATCGCCG AGCACGACGG GCAGGCCGAG
TTCGACGCCG TCCTGGAGGA GGACTTCGGA GACGACCTCC TGCGGCTGAT GTTCGTGTGC
TGCCACCCGG TGCTGTCCAC CGAGGCCCGC GTCGCGCTCA CCCTGCGCCT GCTCGGCGGG
CTCACCACCG ACGAGATCGC CCGGGCCTTC CTGGTGCCCG AGTCCACCGT CGCCCAGCGC
ATCGTGCGCG CCAAGCGCAC CCTGGCCAAG AGGAAAGTGC CCTTCGAGGT GCCCGTCGGC
GAGGACCGCG ACGCCCGGGT GGCCTCCGTG CTGGAGGTCG TCTACCTGGT GTTCAACGAG
GGCTACACCG CCACCTCGGG TACGGAGTGG ACGCGCCCCA CGCTGTGCGA GGAGGCCATG
CGCCTGGGCC GCGTGCTCGC CCAACTGCTG CCCGGGGAGT GCGAGGCGCA CGGGCTGGTG
GCGCTGATGG AGCTGCACGC CTCGCGGCTG CGCGCCCGCG TCGGGCCGGG CGGGGAACCC
GTCCCCCTGG CCGAGCAGAA CCGCGCGCTC TGGGACCGCC TGCTCATCAC GCGCGGGATG
GAGGCCCTGT TCAGGGCACT GCCGCCGGAC CGGAGCCAGC CCGGCGGTCC CTACGTGCTC
CAAGCGGCCA TCGCGGCCGA ACACGCCAGG GCGGTCACCG CCGCGGACAC CGACTGGACG
GTCATCGCCG GGCTGTACCT GGCCCTGGTC AGGGTCACCG GCTCGCCGGT CGTGGAGCTG
AACCGGGCGG TGGCGGTGTC GATGGCCTCG GGCCCGGAGA CCGCGCTGGA GATCGTGGAC
GCGCTGCGGG ACCAGCCGGG GATGGGCGAC TACCACCTGC TGCCCTCCGT GCGCGGCGAC
CTGCTCGTGC GGCTGGACCG CCGGGCCGAG GCCCGCGCCG AGTTCGAGCG CGCGGCCTCC
CTGACCCGCA ACGAGCGCGA GCGCTCGCTG CTCCTGGACC GCGCCCGCGG CTGCGAGGAC
TGA
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| Protein sequence | MSHTDATRAV EAVWRIESAR LVAALTRMVG DVGLAEEFAQ DALVSALEKW PGDGVPDNPG
AWLTTVAKRR VLDRWRRDER FQRRMADLGR EIAEHDGQAE FDAVLEEDFG DDLLRLMFVC
CHPVLSTEAR VALTLRLLGG LTTDEIARAF LVPESTVAQR IVRAKRTLAK RKVPFEVPVG
EDRDARVASV LEVVYLVFNE GYTATSGTEW TRPTLCEEAM RLGRVLAQLL PGECEAHGLV
ALMELHASRL RARVGPGGEP VPLAEQNRAL WDRLLITRGM EALFRALPPD RSQPGGPYVL
QAAIAAEHAR AVTAADTDWT VIAGLYLALV RVTGSPVVEL NRAVAVSMAS GPETALEIVD
ALRDQPGMGD YHLLPSVRGD LLVRLDRRAE ARAEFERAAS LTRNERERSL LLDRARGCED
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