Gene Ndas_5424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5424 
Symbol 
ID9249327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp606595 
End bp607524 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content71% 
IMG OID 
ProductAuxin Efflux Carrier 
Protein accessionYP_003683309 
Protein GI297564336 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.259167 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCGGGG TCTTGATCGG TTTCGGTGTC ATCACCAGCA TCGTCGTCAT CGGCTACATG 
CTCGGGCGCA TCCCGCTCCT CGGCCCGGGG GCCAGGGAGG TGCTCAGCAA GCTCGCCTTC
TACGTGGCCA GCCCCGCGCT GCTATTCACG ATCCTGGCCG ACGTCGACCT CTCCGTCCTG
GTGTCCGGTC CGGTCCTGGT CAGCGTCATC AGCGTGGCCG TCGTGGCGTT CGCCTTCGTC
GTGTTCGGGC TCGTCCGGCG CCAGGGCGTC GGACCGACCA CGGTCGGCGC GCTCGCCTCC
TCGTACGTCA ACGCGGGCAA CCTGGGCATC CCCATCTCCG TCTACGTGCT CGGCGACGCG
TCCCTGGTCG CGCCCATCCT GCTCACGCAG CTCCTGGTCC TGGCCCCGGT CGGCCTCACC
CTCCTGGACC TGGCCGACGG CGACGTGCGC GGGGTGGGCC CCGTCTTCCG GCGGGCGCTG
GGCACGCCGG TCCGCAACCC CGTGGTGATC GCGTCGCTGG CGGGCGTGGC CGTCTCCGCC
TCGGGCTGGG TGCCGCCCGA ACCCCTGATG GAGCCCTTCC ACCTGATCGG CGGCATGGCC
GTCCCCGCCA TGCTGCTGGC CTTCGGGATC TCCCTGCACG GCAGCCCGTT CCCCGGCCGG
GGCCCCGAAC GGGTGCCGAT GCTGTTCGCC GTGGCGCTCA AGTCCGTGGT CCAGCCGCTG
GCGGCGTGGG CCCTGGGCGC CCTGGTCTTC GACCTGGACG CCTCCAGCCT GTTCTCCGTC
GTCGTGCTGG CGGCCCTGCC CACGGCCCAG AACGTCTTCA ACTACGCCAC CCAGTACCGC
ACCGGTGAGG TGATGGTCCG CGAGGTGGTG CTCGTGACCA CCTTCCTCAC CATTCCCGCG
CTGCTCACCG TCACCTTCCT GCTGGGGTGA
 
Protein sequence
MSGVLIGFGV ITSIVVIGYM LGRIPLLGPG AREVLSKLAF YVASPALLFT ILADVDLSVL 
VSGPVLVSVI SVAVVAFAFV VFGLVRRQGV GPTTVGALAS SYVNAGNLGI PISVYVLGDA
SLVAPILLTQ LLVLAPVGLT LLDLADGDVR GVGPVFRRAL GTPVRNPVVI ASLAGVAVSA
SGWVPPEPLM EPFHLIGGMA VPAMLLAFGI SLHGSPFPGR GPERVPMLFA VALKSVVQPL
AAWALGALVF DLDASSLFSV VVLAALPTAQ NVFNYATQYR TGEVMVREVV LVTTFLTIPA
LLTVTFLLG