| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_5415 |
|---|
| Symbol | |
|---|
| ID | 9249318 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014211 |
|---|
| Strand | + |
|---|
| Start bp | 594495 |
|---|
| End bp | 595130 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_003683300 |
|---|
| Protein GI | 297564327 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACGACTA TCGAAATGGA CCAGGCCTCC ACGACCGGTG AGACCCGCGA GGGGGAGCAG
ACGCTGGACT TCGCCACCGC GGTGACACCG TTCGCCGACC AGCTCTACCC CACGGCCCTG
CGGATGACCC GCAACCCCGC CGACGCGGAG GACCTCGTGC AGGAGACCTT CGCCAAGGCC
TTCGCGAATT TCCACCAGTT CCGCGCGGGT ACGAACCTGC GAGCCTGGCT TTACCGGATC
CTGACCAACA CCTTCATCAA CAGCTACCGC AAGAAGCAGC GCGAACCGCG CCAGGAGACC
ACCGACGAGA TCAAGGACTG GCAGCTCGCC GCCGCCGAGG CGCACACGTC CTCCGGCATG
AGGTCGGCCG AGAACGAGGT CCTGGACCAC CTGCCCGACT CCGACATCAA GCAGGCGCTC
GCCCGCCTGC CCGAGGAGTT CCAGGAGGTC ATCTACCTCG TCGACATCGA GGGCTACGCC
TACAAGGAGG TGGCCGAGCG GATGGGGACG CCCCTGGGGA CGGTCATGTC CCGGCTGCAC
CGCGCCCGCC GCCAGCTCCG CGAGATGCTC GCCGACTACG CCCGCGACCG CGGCATGAGG
GTCCCCGCCT CCAGGGCGCA CGCCGCCGCC GAGTAA
|
|---|
| Protein sequence | MTTIEMDQAS TTGETREGEQ TLDFATAVTP FADQLYPTAL RMTRNPADAE DLVQETFAKA
FANFHQFRAG TNLRAWLYRI LTNTFINSYR KKQREPRQET TDEIKDWQLA AAEAHTSSGM
RSAENEVLDH LPDSDIKQAL ARLPEEFQEV IYLVDIEGYA YKEVAERMGT PLGTVMSRLH
RARRQLREML ADYARDRGMR VPASRAHAAA E
|
|---|
| |