Gene Ndas_5397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5397 
Symbol 
ID9249300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand- 
Start bp575621 
End bp576352 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content64% 
IMG OID 
ProductWbqC-like family protein 
Protein accessionYP_003683282 
Protein GI297564309 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.348788 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCC AGGACGGTGC GTCACGCACC GTGGCACTGC ACCAGCCGCA CTACCTTCCG 
TGGCTGGGGC TTTTGGATAA AATTGACCGT TCCGACCGTT TCATCATCCT CGACAACGTC 
CAGTTCGAAC GTCGCGGATG GCAGAACCGA AACTACGTCG GCGGCAGCGG AAAACCCGTC 
CTGCTGACCG TTCCGGTCGT CCAGGGCAGC CGGGACGACC GCATACGGGA CAAAGTTGTT 
GACAACAGTC AGAATTGGAA GTCAAGACAC TACAAGTCAC TCGCGGAACA CTGCTACCGC 
AAAGCGCCCT ACTGGAAGGA TTACCGCGAC GAAATCGCCC ACCTGTACGA ACAGGAGTGG 
GACGGTCTCG CGGACCTGTG CGTGGCGACC ACGCGCATGC TGATGCGGTG CTTCGGGATC 
GACACACCGC TGACGCTGGC CAGTGAGATC GGGGACTTCC CCGGCCGCAA GAGCGAGCTC 
CTCGCCCAGA TCTGCGCCAA AACGGGGGCG CACACCATGC TCTCGGGCGA CGGCGCCCGG 
GACTACCTGG AGCCCGAGAC TCTGCACCGC TACGGGATCG ACGTCCGGTG GCAGGACTTC 
CGGCACCCGG TGTACCCGCA GCACGGGCGC GCCCCAGCCG ACTTCGTCCC TCGTCTGTCG 
GCGATCGACC TTCTCCTCAA CACCGGCCCG GAGGCACTGA ACGTGCTCAG GCAGGCGAGA 
ACCCAGAGCT GA
 
Protein sequence
MSSQDGASRT VALHQPHYLP WLGLLDKIDR SDRFIILDNV QFERRGWQNR NYVGGSGKPV 
LLTVPVVQGS RDDRIRDKVV DNSQNWKSRH YKSLAEHCYR KAPYWKDYRD EIAHLYEQEW 
DGLADLCVAT TRMLMRCFGI DTPLTLASEI GDFPGRKSEL LAQICAKTGA HTMLSGDGAR 
DYLEPETLHR YGIDVRWQDF RHPVYPQHGR APADFVPRLS AIDLLLNTGP EALNVLRQAR 
TQS