Gene Ndas_5388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5388 
Symbol 
ID9249291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp566950 
End bp567957 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content69% 
IMG OID 
Productphosphate ABC transporter, inner membrane subunit PstC 
Protein accessionYP_003683273 
Protein GI297564300 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.730152 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACCG AGGCCCGTGA GGCCCCCCAG GCCCCCGAGG ACTCCCGGCG GGGGACGCTG 
AAGTCCGGCA AGGGGCGCCT GGGCGATCCG ATCTTCAAGT GGGCCGTCGC GGCCTGCGGC
ACCCTCGTCC TGATCATCCT GGCGCTGATG GTCATCCGGA CCACCAGCGA GGCCTGGCCG
GTCTTCGCCA AGGAGGGCTT CTTCGGCTTC CTCCTCGGGG AGGACTGGCA GAGCGGCGGA
TCCCGCACGG AGATCACCGG CACCTACGGC GCCTGGCCCT TCATCTACGG AACCCTGGTC
ACGGCGACCA TCGCGATCGC CATCGCGCTG CCGCTGGCGA TCATGGTCGC CGTCTACCTG
ACCCACCTGG CCCCGCGCCG CCTCGCCAAG CCGCTGTCGT ACACGGTCGA GCTGCTCGCC
GCCGTGCCCA GCGTCATCTT CGGCCTCTGG GGCCTGCACT GGTTCCTGCC GAACGTGATG
CGCCCCTTCT TCGTCTGGCT GGAGAGCACC TTCGGCTGGT TCTTCCTCTT CGAGGGACCG
GTGCGCGGCG TCGGCTACCT GCCCGCGGGC ATCGTGCTGG CCATCATGAT CCTGCCGATC
ATGACGGCGC TCATCCGCGA GGTCGTCGTC GTCCAGCCGA TCGAGCAGCA GATGGCCGCC
TACGCCCTGG GCTCCACCCG GTGGGAGGTC ATCACCAAGG TGATCCTGCC GGCCAGCTTC
TCCGGGATCG TGGCCGCCGC CATGCTGGGA CTGGGCCGCG CCCTCGGCGA GACCATCGCC
GTGCTGATGC TGATCGGCGG AACCCAGGGG TGGAGCGGCA GCCTGTTCGG CACCGGAAGC
AGCATGGCCT CGCACATCGC CGCGTCCTTC GGTGAGGCCT CGCCCGAGGT CCGGACGGCG
CTGATGGCGA TCGGCGTCGC CCTCTTCCTG GTCACGATGA TCGTCAACAT CCTGGCCCGC
GTCATCGTCT GGCGCCTGGG GCAGTTCACG GGAGACTCCG CCGTATGA
 
Protein sequence
MSTEAREAPQ APEDSRRGTL KSGKGRLGDP IFKWAVAACG TLVLIILALM VIRTTSEAWP 
VFAKEGFFGF LLGEDWQSGG SRTEITGTYG AWPFIYGTLV TATIAIAIAL PLAIMVAVYL
THLAPRRLAK PLSYTVELLA AVPSVIFGLW GLHWFLPNVM RPFFVWLEST FGWFFLFEGP
VRGVGYLPAG IVLAIMILPI MTALIREVVV VQPIEQQMAA YALGSTRWEV ITKVILPASF
SGIVAAAMLG LGRALGETIA VLMLIGGTQG WSGSLFGTGS SMASHIAASF GEASPEVRTA
LMAIGVALFL VTMIVNILAR VIVWRLGQFT GDSAV