Gene Ndas_5376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5376 
Symbol 
ID9249279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand+ 
Start bp557652 
End bp558704 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content72% 
IMG OID 
ProductD-alanine/D-alanine ligase 
Protein accessionYP_003683262 
Protein GI297564289 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTGAGG CAAGGACACG CGTCGCCGTC GTCTTCGGTG GACGCAACGG GGAGTACGAC 
GTCTCGTGCG CGTCGGCGAT GTCGGTCCTC ACCCACCTGG ACCGCGACCG GTACGAGGTC 
GTCCCGGTGC GGATCACGCG CGCCGGGGCG TGGGTGGTGG GCACCGACAC CGACGACCCC 
GCCGCGCTGG ACGCGGAGCG CCTGACGGCC CTGACCCCCG AGCCCGGCGG CGAGAGGGAG 
CGGCGCCCGG GTGACGGCCT GGGCGAGGCG ATCCTCGCGT TGGGCGAGGC GGACGTGGTC 
TTCCCCGTCA TCCACGGCCC CTACGGCGAG GACGGCACGA TCCAGGGGAT GCTCGAACTC 
CTGGGAGTGC CCTACGTGGG CAACGGCGTG CTCGCCAGCG CCACCGGTAT GGACAAGGCG 
ACCACCAAGA CGCTGCTGCG CGCGGCGGGG CTGCCGGTCG CGCGGGACGT GGTGCTGCGC 
GGACCGGACG ACGAGGTCTC GCCGCAGGAG CGCGCCGAGC TGGGGCTGCC CGTGTTCGTC 
AAGCCCGCGC GCAGCGGTTC CAGCCTGGGG GTGACGCGGG TCGGCGACTG GTCGGAGCTG 
GAGGCCGCCG TCAAGACCGC GCGCGAGTTC GACACCAAGG TCCTGGTGGA GGAGGCGGTC 
GTCGGACGCG AGGTCGACCT GGCCGTCCTG GAGCTGCCCG ACGGCGCGCT CAAGGTCGGG 
CCGCCGCTGG AGATCCGGGT CGCGGACACG GAACGCTTCT TCGACTACGA CACCAAGTAC 
GGGGGCGACG CGGTCTTCGA CATCCCCGCC GACCTGCCGG TCGGGATCCA GACGCAGCTG 
AGCGACCTCG CCCTGGGCGT GTTCGAGGCG GTCGGCTGCT CCGGCCTGCT GCGCGTGGAC 
TTCTTCCTGC GCGGGGGCAC CGAACCCGTC GTCAACGAGG TCAACACCCT GCCCGGGTTC 
ACCGCGCACT CGCAGTACCC CCAGATCTGG CGGGCTACGG GCCTGGAGTA CCCCGAGCTG 
CTGGACAGCC TCATCCGGAC CGCGCTGGCC TGA
 
Protein sequence
MPEARTRVAV VFGGRNGEYD VSCASAMSVL THLDRDRYEV VPVRITRAGA WVVGTDTDDP 
AALDAERLTA LTPEPGGERE RRPGDGLGEA ILALGEADVV FPVIHGPYGE DGTIQGMLEL 
LGVPYVGNGV LASATGMDKA TTKTLLRAAG LPVARDVVLR GPDDEVSPQE RAELGLPVFV 
KPARSGSSLG VTRVGDWSEL EAAVKTAREF DTKVLVEEAV VGREVDLAVL ELPDGALKVG 
PPLEIRVADT ERFFDYDTKY GGDAVFDIPA DLPVGIQTQL SDLALGVFEA VGCSGLLRVD 
FFLRGGTEPV VNEVNTLPGF TAHSQYPQIW RATGLEYPEL LDSLIRTALA