Gene Ndas_5363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5363 
Symbol 
ID9249266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand- 
Start bp539515 
End bp540162 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content72% 
IMG OID 
Productbeta-Ig-H3/fasciclin 
Protein accessionYP_003683249 
Protein GI297564276 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCGCA AGAACAGCCT CACCATCACG GCCGCCGCTG CCGCGCTCGC CTTCGGTCTG 
ACCGCCTGTG GCGGCGACAT GGGCGGCGGG GAGGAGGCCG CCGAGGAGAC CCCCACCGCG 
ACCGAGTCCG AGAGCGGCGG CATGGGCGGC GAGGAGGGCA CCACCGAGAT GGCGGGCGAG 
AACTTCGGTT CCGGCTGCGC CGAGGTGCCC GCCGACGGCG AGGGCAGCTT CGAGGGCATG 
GCGGACGACC CGGTCGCCAC CGCCGCGTCC AACAACCCGG TGCTGTCCAC GCTGGTGACG 
GCCGTGACCG AGGCGGACCT GGTGGACACG CTCAACTCGG CCGAGGACAT CACGGTCTTC 
GCCCCGGCCG ACCCCGCGTT CGAGGCGATC CCGCAGGAGG ACCTCGACGC GCTGCTGGCC 
GACCAGGAGC AGCTGACCGA GGTGCTGACC TACCACGTGG TCGAGGGCCG CCAGACCCCG 
GCCGACCTGG AGGACGGCAC GTTCACCTCG CTCCAGGGCG GAGAGGTCAC CACCGAGGGC 
TCCGGCGAGG AGTTCACGGT GAACGGCGAG GCGGCCGTCA TCTGCGGCAA CGTGCAGACG 
GCCAACGCCA CGGTGTACAT CATCGACGGC GTGCTGATGC CCGCCTAA
 
Protein sequence
MVRKNSLTIT AAAAALAFGL TACGGDMGGG EEAAEETPTA TESESGGMGG EEGTTEMAGE 
NFGSGCAEVP ADGEGSFEGM ADDPVATAAS NNPVLSTLVT AVTEADLVDT LNSAEDITVF 
APADPAFEAI PQEDLDALLA DQEQLTEVLT YHVVEGRQTP ADLEDGTFTS LQGGEVTTEG 
SGEEFTVNGE AAVICGNVQT ANATVYIIDG VLMPA