Gene Ndas_5362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5362 
Symbol 
ID9249265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp538648 
End bp539259 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content73% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003683248 
Protein GI297564275 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.856682 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAGC ACGCCGCGAT ACCCCGGGGC CCCCGCGGGG CGGAGGCGGA GCCTCCGGTT 
CCGCCGGCCC AGCGGCTCAC GGAGCTGCTC CGCCAAGTGG CCCGGGGTGA GGAGAGCGCG
TTCGGCGAGG TGTACGACCT GGTCATCCCG TCGGTGTACG GGCTCGTCCG CCGTGTGCTG
CGCGACCCCG CCCAGTCCGA GGAGGTCGCC CAGGAGGTGA TGGTGGAGGT GTGGCGCACC
GCCTGCCGTT ACGACGAGCG GCGCGGCAGC CCCCAGGCGT GGGTGATGAC GCTCGCGCAC
CGCCGGGCGG TGGACCGGGT GCGCTCCGAG CAGGCCGCCA CCGACCGGGA GGCCAGGGTG
GCGGCGGCGA GCACTCAGCG CCCCTACGAC GAGGTGGCCG AGGAGGCCAC GAACCGTCTG
GAGCGCGAGC GGGTGCGCCG CTGTCTGGAG ACCCTGACCG AACTCCAGGG CCAGTCCGTA
CGTCTGGCCT ACTACGGCGG ATACACCTAT CGTGAGGTGG CCCGCCTGCT TTCGACGCCG
TTGGGCACCG TGAAGACGCG GATGCGCGAC GGCCTGATCC GGCTGCGGGA CTGCTTGGGG
GTGGAGTGGT GA
 
Protein sequence
MDEHAAIPRG PRGAEAEPPV PPAQRLTELL RQVARGEESA FGEVYDLVIP SVYGLVRRVL 
RDPAQSEEVA QEVMVEVWRT ACRYDERRGS PQAWVMTLAH RRAVDRVRSE QAATDREARV
AAASTQRPYD EVAEEATNRL ERERVRRCLE TLTELQGQSV RLAYYGGYTY REVARLLSTP
LGTVKTRMRD GLIRLRDCLG VEW