Gene Ndas_5342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5342 
Symbol 
ID9249245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp517916 
End bp518674 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content71% 
IMG OID 
Productprotein of unknown function DUF81 
Protein accessionYP_003683228 
Protein GI297564255 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.164532 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.123521 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTCT GGGAGGCGGC GGTCATCCTT CTCGCCGGTG TGGCGGCCGG CGGGATCAAC 
GCCATCGCGG GGTCGGGGAC GCTGTTCACC TTCCCCGTGC TCCTGGCGCT CGGCTACCCG
CCGATCACGG CGACCGTCTC CAACAGCATC GGCCTGGCCC CCGGGACGCT CAGCGGCACC
ATCGCCTACC GCCGGGAGCT GGCGGGCCAG CGCGCCCGCA TCCTCCGGCT GGGCAGCATG
TCCTTCCTCG GAGCGGTGAC CGGCGCCCTG CTGCTGATCT ACCTGCCTCC GGGCGTGTTC
GAGGCCGTGG TGCCGTTCAT GATCGGCCTC GCCTGCGTGC TGATCGTCCT CCAGCCGCGC
ATCACCCGGT GGGTCCGCTC GCGCAGGCCC GCCCACAGGG ACGGCGGCCC TCTGCTGCCG
CTGGGCGCCT ACGCGACCGG CGCCTACGGC GGCTACTTCG CCGCCGCCCA GGGGATCATC
CTCATGAGCA TCCTGGGCAC CGCCCTGGAC GAGGAGATCC AGCGGCTCAA CGCCCTGAAG
AACATGCTCG CCACCATCGT CAACACCACG GCCTCGGTGT TCTACATCGT CCTGGCCGAG
CCCGCCTGGC CGGTGGTCGG CCTCATCGCC TGCGGGACCA TCATCGGCGG GTACCTGGGC
GGAAGGTTCG GGCGCAAGCT CAGCCCGGCC GCCCTGCGGG TGTGCCTGGT CCTGGTGGGA
CTGTCCGCCG CGGTCCAGAT CATCATGGGC CGGGTCTGA
 
Protein sequence
MELWEAAVIL LAGVAAGGIN AIAGSGTLFT FPVLLALGYP PITATVSNSI GLAPGTLSGT 
IAYRRELAGQ RARILRLGSM SFLGAVTGAL LLIYLPPGVF EAVVPFMIGL ACVLIVLQPR
ITRWVRSRRP AHRDGGPLLP LGAYATGAYG GYFAAAQGII LMSILGTALD EEIQRLNALK
NMLATIVNTT ASVFYIVLAE PAWPVVGLIA CGTIIGGYLG GRFGRKLSPA ALRVCLVLVG
LSAAVQIIMG RV