Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_5342 |
Symbol | |
ID | 9249245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014211 |
Strand | + |
Start bp | 517916 |
End bp | 518674 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | protein of unknown function DUF81 |
Protein accession | YP_003683228 |
Protein GI | 297564255 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.164532 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.123521 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAACTCT GGGAGGCGGC GGTCATCCTT CTCGCCGGTG TGGCGGCCGG CGGGATCAAC GCCATCGCGG GGTCGGGGAC GCTGTTCACC TTCCCCGTGC TCCTGGCGCT CGGCTACCCG CCGATCACGG CGACCGTCTC CAACAGCATC GGCCTGGCCC CCGGGACGCT CAGCGGCACC ATCGCCTACC GCCGGGAGCT GGCGGGCCAG CGCGCCCGCA TCCTCCGGCT GGGCAGCATG TCCTTCCTCG GAGCGGTGAC CGGCGCCCTG CTGCTGATCT ACCTGCCTCC GGGCGTGTTC GAGGCCGTGG TGCCGTTCAT GATCGGCCTC GCCTGCGTGC TGATCGTCCT CCAGCCGCGC ATCACCCGGT GGGTCCGCTC GCGCAGGCCC GCCCACAGGG ACGGCGGCCC TCTGCTGCCG CTGGGCGCCT ACGCGACCGG CGCCTACGGC GGCTACTTCG CCGCCGCCCA GGGGATCATC CTCATGAGCA TCCTGGGCAC CGCCCTGGAC GAGGAGATCC AGCGGCTCAA CGCCCTGAAG AACATGCTCG CCACCATCGT CAACACCACG GCCTCGGTGT TCTACATCGT CCTGGCCGAG CCCGCCTGGC CGGTGGTCGG CCTCATCGCC TGCGGGACCA TCATCGGCGG GTACCTGGGC GGAAGGTTCG GGCGCAAGCT CAGCCCGGCC GCCCTGCGGG TGTGCCTGGT CCTGGTGGGA CTGTCCGCCG CGGTCCAGAT CATCATGGGC CGGGTCTGA
|
Protein sequence | MELWEAAVIL LAGVAAGGIN AIAGSGTLFT FPVLLALGYP PITATVSNSI GLAPGTLSGT IAYRRELAGQ RARILRLGSM SFLGAVTGAL LLIYLPPGVF EAVVPFMIGL ACVLIVLQPR ITRWVRSRRP AHRDGGPLLP LGAYATGAYG GYFAAAQGII LMSILGTALD EEIQRLNALK NMLATIVNTT ASVFYIVLAE PAWPVVGLIA CGTIIGGYLG GRFGRKLSPA ALRVCLVLVG LSAAVQIIMG RV
|
| |