Gene Ndas_5328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5328 
Symbol 
ID9249228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp492122 
End bp493273 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content77% 
IMG OID 
Producttype II secretion system protein E 
Protein accessionYP_003683214 
Protein GI297564241 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.194957 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.192507 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCCCC TGGTGGAGGC CGTGCGCAAC CGCCTGGTGG CGTCCGGGGT GCCGGTGAGC 
CCGTCGAGCG TCGCTGCGGC GCTGCGCGCC GAGGGAGGTC TGCTGGGCGA CACCGAGGTG
CTGTCCATGA CCCGCCGTCT GGCCGCCGAC CTGTCGGGGG CGGGGCCGCT GGAGGAGCTC
ATGACGTCGG GGGTCACCGA CATCCTCGTC AACGGTCCCG ACGAGGTGTG GGTGGACGAC
GGCGGAGGCC TGCGCCGGGC CGGGGTGCGC TTCGAGTCGG CGGACGCGGT GCGCCGACTG
GCCCAGCGGC TGGCGGCGCA GGCGGGGAGA CGGTTGGACG CGGCCGTGCC CTACGTGGAC
GCCCGGCTTC CCAGCGGCGC GCGGCTGCAC GCGGTGCTGC CGCCGGTGGC GCCCGCCGGG
GCGTGCGTGT CGCTGCGGCT GCCTCCCCGG CGGGTGTTCA CCCTGGAGCG GTTGGCCCGG
CGGGGGACGG TCACCCCGTG CGGGGCCGAG CTGCTGCGGT CCCTGGTGGC CTCGCGGGTG
CCGTTCCTGG TCAGCGGGGG CACCGGCACG GGCAAGACCA CGCTGCTGTC GTGCCTGCTC
TCCCTGGTGG ACCCGGGGGA GCGGATCGTC CTGGCCGAGG ACTCCCCCGA GCTGCGGCCC
GAGCATCCGC ACGTGGTCCG CCTCCAGACC CGTCCGCCCA ACATCGAGGG CAGTGGCGAG
GTGTCGCTGG AGACCCTGGT CCGGCAGGCG CTGCGGATGC GTCCGGACCG GCTGGTGGTC
GGCGAGGCGC GCGGGCCGGA GATCGTGTCC TTGCTGGGCG CTCTGAACAC CGGGCACGAG
GGCGGCGCGG GGACCCTGCA CGCCAACGGC GCGGGCGACG TGCCCGCCCG GGTGGAGGCG
CTGGGGTGCG CGGCCGGACT GGACCGGGCC GCCGTGCACA GCCAGCTGGC CGCCACCAGG
GTCATGGTCG TGCACCTGGT CCGGGACTCC GGCGGGCGGC GCCTGGCCGA GCTGCGGGTG
CTCAGACGCG GTTCGGACGG GCTGGTGGAG GCGGTGCCGG CGGTGTCCTT CGGTCCCGAC
GGCAGCCGCC GGGAACACGC CGGGGCGGAC GAGGTGGCCG CCCGGCTGGG CGGGGGGTGG
CGCCGGTGGT GA
 
Protein sequence
MSPLVEAVRN RLVASGVPVS PSSVAAALRA EGGLLGDTEV LSMTRRLAAD LSGAGPLEEL 
MTSGVTDILV NGPDEVWVDD GGGLRRAGVR FESADAVRRL AQRLAAQAGR RLDAAVPYVD
ARLPSGARLH AVLPPVAPAG ACVSLRLPPR RVFTLERLAR RGTVTPCGAE LLRSLVASRV
PFLVSGGTGT GKTTLLSCLL SLVDPGERIV LAEDSPELRP EHPHVVRLQT RPPNIEGSGE
VSLETLVRQA LRMRPDRLVV GEARGPEIVS LLGALNTGHE GGAGTLHANG AGDVPARVEA
LGCAAGLDRA AVHSQLAATR VMVVHLVRDS GGRRLAELRV LRRGSDGLVE AVPAVSFGPD
GSRREHAGAD EVAARLGGGW RRW