Gene Ndas_5325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5325 
Symbol 
ID9249225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand+ 
Start bp489717 
End bp490373 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content74% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003683211 
Protein GI297564238 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.000362726 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.534868 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCCTG CCCCCGTCTC CGTGCTGATG TGCGCCCTCC TGCTGGGAGC CCCCGCCCAG 
CCCGGGGGCG CACCGCCCTG CCCCGCCTCG CCCGCGCCAC AGATCACAGA TCCCCTCGGT 
GTCGACCACT CCGGTGTTTC CATCGCTCCC GAGAACTCCG CGCACGCCGC TGGTTCCGCC 
GGTCTCACCC ACGCCCTTGG ACCCCAAGGC AGAACGGGCG CTACCGGTGT AGAGGATCCG 
GCCTCCTCCA ACGGGCCCAC CGAGGCCGCG CGCTCCGATG ACCCCCTCCG CTCCGACGAA 
CCCGTCGGCT TCGGAGCCCT CGAGAACTCC GGCCGAACGG CCCCTTCCGC CGGTCCCGAG 
CGGTGCGCCG AACCGTCACC GGTCCCCGCC TCCCCGGAAC CGTCCCGCCC CGTGCGGAAG 
AGCCCACGCG ACGCGACGGA CGCGCCCTCG CCCCTCAGCG AACCGGTGGT GTACCGCACG 
GCCGCAGCCC CGACCCCGAC CGGTACGGCG TTGCGGATCG TCGGCAACGT CTCGACCGGA 
ATCCTGGTGC TGCTGTGCGT CGTGGTGCCG GTGCTGCGCC TGTCCGTGGG CTGGCCCCGC 
TTCCCCGTCC CCTACGAGGG CCAGCGGCGG CGCGGCTCCC GGGACGGGCA ACCCTGA
 
Protein sequence
MSPAPVSVLM CALLLGAPAQ PGGAPPCPAS PAPQITDPLG VDHSGVSIAP ENSAHAAGSA 
GLTHALGPQG RTGATGVEDP ASSNGPTEAA RSDDPLRSDE PVGFGALENS GRTAPSAGPE 
RCAEPSPVPA SPEPSRPVRK SPRDATDAPS PLSEPVVYRT AAAPTPTGTA LRIVGNVSTG 
ILVLLCVVVP VLRLSVGWPR FPVPYEGQRR RGSRDGQP