Gene Ndas_5293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5293 
Symbol 
ID9249191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand+ 
Start bp455972 
End bp457171 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content70% 
IMG OID 
Productintegrase family protein 
Protein accessionYP_003683179 
Protein GI297564206 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGCG CGTGGGTCTA CGACCGCACC AAGGACAGGG CGTACACGGA GGCGGTGAGC 
AAGGCCAAGG CGTCCAAGCG CACTCCGCCC GGCCGGTGGT GGGTCCGCTA CTACGACCCC 
TCCGGGAAGA TCAAGAGCGG CGGCGTCTTC CAGAAGAAGC CGGACGCGGA GAAGAAGCGG 
ACCGAGATCG AGAACAGCCT TCACGAGGGC TCCTACCGCA ACCCCCATGA CGCCAAGGTC 
ACCGTGGCGG AGATGGCGGA GAAGTGGCTC ATCACCCGCA CGGACATCAA ACGATCCACG 
TGGTGGCAGT ACCGGGCGGT CCTGGACAAC CACGTGCTGC CGCGCTGGGG AGACCTGCGC 
CTCTCGGCAG TCCACGCCGA GGACGTGGCC GTGTGGGTGG CCCATCTCCA GAAGCCCCGG 
GACGAGGGCG GTAGCAACCT GGGGGCCTCG CAGACCCGGC ACGCGCACGT CGTGCTGTCG 
ATGGTCCTGG GCTGGTGCGT CCCCCGGCGC ATTCCCTTCA ACCCGGCCAA GGGCGTACCG 
CTGCCCAAGC CCAGTGAGGC CGAACACGTC TACCTCGACC ACGCCCAGGT GGAGGCGCTG 
GCCGACGCCT CCCTGACGCT GCGCACCAAG TACGGGCAGG AACTCGCCTC GGCCAGGGTG 
AGCCGGGCGC TCGTCCTGCT CCTGGCCTAC ACCGGCATGC GATGGAGTGA GGCCGCCGCG 
CTGCGCGTGG GAAGGGTGGA CCTGGACCGG CGGCGGGTGC GGGTCGTCGT GACCTTCGCC 
GAGGTGGACG GCAGGCTCGT CGAACAGCCC CCGAAGAACG GCAGGTTCCG GACCGTGCCG 
GTTCCCCGGT CCCTCGTCCC CGAACTGCGG CCCTTCGTGA AGGGGCGGCC GGATGACGCG 
CTGGTCTTCA CCACCAGGCG GGGCGCTCCG CTGCGCATCC GGAACTGGCG CAACCGTGAG 
TTCGCCCTGG CGGTGAAGGT GGTCGGGCTC GACGGCATGG GGCTGACCCC CCACAAGCTC 
CGGCACACCG CCGCGTCCCT GGCGATCGCG GCCGGTGCGG ACGTCAAGGT CGTGCAGGCC 
ATGCTCGGCC ACAAGACGGC GACCATGACC CTGGACCGGT ACGGGCACCT GTTCCCGGAC 
CGCCTGGACG AGGTGGCCGA CGCGATGGAC GCCGCCCGTC TGCGGGTCCT CGCCGCCTGA
 
Protein sequence
MARAWVYDRT KDRAYTEAVS KAKASKRTPP GRWWVRYYDP SGKIKSGGVF QKKPDAEKKR 
TEIENSLHEG SYRNPHDAKV TVAEMAEKWL ITRTDIKRST WWQYRAVLDN HVLPRWGDLR 
LSAVHAEDVA VWVAHLQKPR DEGGSNLGAS QTRHAHVVLS MVLGWCVPRR IPFNPAKGVP 
LPKPSEAEHV YLDHAQVEAL ADASLTLRTK YGQELASARV SRALVLLLAY TGMRWSEAAA 
LRVGRVDLDR RRVRVVVTFA EVDGRLVEQP PKNGRFRTVP VPRSLVPELR PFVKGRPDDA 
LVFTTRRGAP LRIRNWRNRE FALAVKVVGL DGMGLTPHKL RHTAASLAIA AGADVKVVQA 
MLGHKTATMT LDRYGHLFPD RLDEVADAMD AARLRVLAA