Gene Ndas_5270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5270 
Symbol 
ID9249168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand+ 
Start bp435128 
End bp436075 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content74% 
IMG OID 
ProductPrephenate dehydratase 
Protein accessionYP_003683156 
Protein GI297564183 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.271199 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAACC GCTACGCCTA CCTCGGCCCC GAGGGCACCT TCACCGAAGC CGCACTGCGC 
AACCTGCGTC CGGACGCGCC CGACGAGGCC CGCGTTCCCT GCGAGGGGGT AGCCGCGGTC 
TTCGACGCGG TCCGCTCCGG CGCGGTCGAC GGCGGAGTCG TCCCCCTGGA GAACTCGGTC 
GAGGGCGGTG TCACCGCGAC CATCGCCGAA CTCGTCAACG GCGACCCGCT CCTCGTCACC 
GGCGAGACCG CGGTCCCGGT CGAGTTCTCC CTGTTCGCGC GGGGCGGGAC GGTGCTGGAG 
GACGTCAAGC GGGTGGCCAC CCACCCCCAC GCCCTCGCCC AGTGCCGGGG CTGGCTCTCC 
CGCAACCTGC CCGACGCGGA CACGCACACC GTCTCCTCCA CGGCCGCCGC CGCGCGCGCC 
GTCTCCGAGC CCGGCGCGCC CTACGACGCG GCCATCTGCG CCGTGATCGC CGGGGAGCGC 
TACGGCCTGC ACGCCCTGGC CTCCGGTATC GGCGACCGCT CCGACGCGGC CACCCGCTTC 
ATCTACCTGT CCCGGCCCGG CGTCCTGCCC GGGCCCACCG GAGCCGACCT GACCTCGCTC 
GTCGCCTTCA TCGCCGACGA CCACCCCGGT GCCCTGATCG AGGTGCTCAA CCAGTTCGCC 
GTGCGCGGGG TCAACCTCAC CCGGCTGGAG TCGCGCCCCA CCGGCGACCG GCTCGGCAGC 
TACTGCTTCT GCATCGACGC CGAGGGACAC GTGGCCGAGG CCCGGGTCGG CGAGGCCCTC 
ATGGGCATCC GGCGGGTGTG CCGGGACGTG CGCTTCCTGG GCAGCTACCC GCGCAGCGGC 
CGGACCACCG AGAACGACCC GCCGCTGCGG CCCCGACCGG CCACCGACGC CGACTTCGCT 
GAGGCCGAGC AGTGGCTGGC GCGCATCCGC GCCGGTCAGG TCGACTGA
 
Protein sequence
MPNRYAYLGP EGTFTEAALR NLRPDAPDEA RVPCEGVAAV FDAVRSGAVD GGVVPLENSV 
EGGVTATIAE LVNGDPLLVT GETAVPVEFS LFARGGTVLE DVKRVATHPH ALAQCRGWLS 
RNLPDADTHT VSSTAAAARA VSEPGAPYDA AICAVIAGER YGLHALASGI GDRSDAATRF 
IYLSRPGVLP GPTGADLTSL VAFIADDHPG ALIEVLNQFA VRGVNLTRLE SRPTGDRLGS 
YCFCIDAEGH VAEARVGEAL MGIRRVCRDV RFLGSYPRSG RTTENDPPLR PRPATDADFA 
EAEQWLARIR AGQVD