Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_5258 |
Symbol | |
ID | 9249156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014211 |
Strand | - |
Start bp | 421530 |
End bp | 422708 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003683144 |
Protein GI | 297564171 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.669447 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGCCC TGCCCGACCG CCCCCCGCCC CCCGAGGAGC CCCGGGGCGC CACCGCCGCC GGACCCGGGG GCCCCGAGGC CCCGGCAGCC GCGGACCCGC GGGGCGAGGC GCCCCAGCGG GTGCTCGTCT GGCGGCGCTT CCGCCGCAAC AAGCTGGCCG TCACCGGTGC GCTCGTGCTG TGCGCGCTGG TCCTGGTGTC GGTGTTCTCC GAGTTCGTCG CGCCCAGCAC ACCGGGCGCC TACAACGCCG ATCGCACCTA CGCCCCGCCG CAGACGCTGC GCGTCGTGGA CACCTCCGAC GGGTTCGACC TGGGCATGTA CGTGTACGGC TACCAGGTGG AACGCGACCC CGAGACGCTC GCCAACACCT ACACCGTCGA CGAGTCCGTG AAGATCCCGG TCGGCCTGTT CGTGCGCGGC GAGCCCTACG AGATGTGGGG CCTGATCCCC TCGGACGTCC ACCTGATCGG CGCCAGCGAC CCGGACCAGG AGGTCTACTT CCTGGGCGCC GACCGCAACG GCCGCGACAT GGCATCCCGG ATCGTCTACG GCACCCGGGT GTCGATGTCC ATCGGCCTGG CCGGGGTCGC GCTGTCCTTC GTCCTGGGAC TCGTGCTCGG CGGTCTGTCC GGCTACCTGG GCGGGCGCGT GGACAACGCC ATCCAGCGCG TCATCGAGTT CCTGATGTCC ATCCCGACGA TCCCGCTGTG GATGGGCCTG TCCGCCGCCG TCCCCCGCGA GTGGGGGTCG GTGCAGACCT ACGTCGCCAT CACCGTGCTC CTGTCGCTCA TCGGCTGGAC CGACCTGGCA CGCGTGGTGC GCGGCCGGTT CCTGTCGCTG CGCCAGGAGG ACTTCGTGAC GGCCGCCCGG CTGGACGGCT GCGGCACCGG GCGGGTCATC GCCCGCCACA TGCTGCCGTC CTTCGCCAGC CACATCATCG CCTCGCTGAC CCTGGCCGTG CCGTTCATGA TCCTGGCCGA GACCTCACTG TCCTTCCTGG GCCTGGGTCT GCAGGCGCCG GTCGTGAGCT GGGGCGTCCT GCTCCAGGAG GCGCAGAACA TCCACTCGAT CGCGGGCGCC CCCTGGCTGC TGCTGCCCGG GGCCGCGGTG ACGGTGGCGG TGCTGGTGCT CAACTTCGTC GGCGACGGCG TCCGCGACGC CGCCGACCCG TACAGGTGA
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Protein sequence | MAALPDRPPP PEEPRGATAA GPGGPEAPAA ADPRGEAPQR VLVWRRFRRN KLAVTGALVL CALVLVSVFS EFVAPSTPGA YNADRTYAPP QTLRVVDTSD GFDLGMYVYG YQVERDPETL ANTYTVDESV KIPVGLFVRG EPYEMWGLIP SDVHLIGASD PDQEVYFLGA DRNGRDMASR IVYGTRVSMS IGLAGVALSF VLGLVLGGLS GYLGGRVDNA IQRVIEFLMS IPTIPLWMGL SAAVPREWGS VQTYVAITVL LSLIGWTDLA RVVRGRFLSL RQEDFVTAAR LDGCGTGRVI ARHMLPSFAS HIIASLTLAV PFMILAETSL SFLGLGLQAP VVSWGVLLQE AQNIHSIAGA PWLLLPGAAV TVAVLVLNFV GDGVRDAADP YR
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