| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_5247 |
|---|
| Symbol | |
|---|
| ID | 9249144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014211 |
|---|
| Strand | - |
|---|
| Start bp | 407433 |
|---|
| End bp | 408929 |
|---|
| Gene Length | 1497 bp |
|---|
| Protein Length | 498 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_003683133 |
|---|
| Protein GI | 297564160 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0592329 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCCT ACGAACCGTC TTCCCAGAAC GGTCCCGGTG ACCTCACCGG GACCGTTCTG
AGCGACCGTT ACCGCCTGGA GGAGCAGGTG GGCTCCGGTG GCATGGGCAC GGTCTGGAAG
GCCACCGACA CCCTGCTCAA CCGGCCCGTG GCGGTCAAGC TGCTGCACCC CTCCCAGATG
GCCGAGCCCA CGGCGAGGGA ACGGTTCCGC ACCGAGGGCC GGATCACCGC CGGCCTCTCC
CACCCCGGGA TCGCCCAGGT CTACGACTAC GGCGAGGAGA ACGGCCGCGC CTTCCTGATC
ATGGAACTCG TGGTCGGCGA ACCGCTCTCG CAGGTCCTGC GCGAGCAGGG CCACCTCAGC
GCGGACCAGA CCCTGGACTT CGTGTACCAG GCGGCCAAGG CCCTGGCCGC CGCGCACGCG
CGCGGCGTGG TGCACCGCGA CATCAAGCCG GGCAACCTGC TGGTCACCCC GGACGGCCAG
CTCAAGCTGA CCGACTTCGG CATCGCCCGC GGCGACATGT CGGTCACCCT CACCCAGACC
GGCATGGTCA TGGGCACCGC CCAGTACATC TCCCCCGAGC AGGCCTCGGG CAGGCCCGCG
ACCTCCTCCT CGGACCTGTA CGCCCTCGGC GTGGTGGCCT ACGAGTGCCT GGCCGGAACA
CCGCCGTTCA CCGGCGACAC CCCGGTGGCG CTGGCCCTGG CGCACACCCG CGACGAGCCG
CCGGAACTGC CCGAGGACGT GCCCGACGAC GTCAACCACC TGGTGTCCTC CCTCCTGTTG
AAGGAGCCCG AGGAGCGGCC CGCGTCGGCC AGCGAGGTCG CGCACACGGC CGCGGTGATC
CGCTCCAACG CCGGAACCGG TCCGCCCACA CCCTCCACCG GGTTCCAGGG GATGGCGCAG
ACCGCCGTGG TGGGAGCGGT GACCGGACCC GGCTCCGGCT CGATGACGTA CCGGACCGGG
GGGCAGCCGA CCGCCGTCGC CGGTCAGGAG GACGCGTCGG CTAGGCTGGC CGGGGCACCG
GAGCGGCGCC GCCGCGTCAG CGTGCCCGTG ATCCTCGCGG CCGCGGCCGC GGCGATCATC
ATCGCGGCCG CGGTGGTGGC CGGATTCCTG TCCAACGGGA GGTCCGAGGT GGGCAACATG
CGCGACACCG TCGACCCTCC CGCGGCGAGC CCTTCCTCCT CTCCGGAGGA GACCGAGGAG
CCCGTGGAGT CCGCCCCGGC GGACGTCCCC ATGGCCCCGG AGGGCGACAC CGGCTGGAAT
ACGCAGCCGC AGGACCCGGT GGGGAGTCCG AGCCCCTCCC CGGACGAGGA CGCCGAGGAG
AGCGACGCCC CCGAAGACGG TGAGGACGAC GACTCCGAGG GCGGCCAGAG CCCTCCGCCC
GACCCCGGCA CGGGTGAGAC CCCGGAGCCC CCGCCGAACA ACGGCGGGGG AAACAACGGC
GGTGACGACG GCAGTGGCGG TAACAACGGC GGCGGAGAAG AAGTAGGCAC CACCTAG
|
|---|
| Protein sequence | MSAYEPSSQN GPGDLTGTVL SDRYRLEEQV GSGGMGTVWK ATDTLLNRPV AVKLLHPSQM
AEPTARERFR TEGRITAGLS HPGIAQVYDY GEENGRAFLI MELVVGEPLS QVLREQGHLS
ADQTLDFVYQ AAKALAAAHA RGVVHRDIKP GNLLVTPDGQ LKLTDFGIAR GDMSVTLTQT
GMVMGTAQYI SPEQASGRPA TSSSDLYALG VVAYECLAGT PPFTGDTPVA LALAHTRDEP
PELPEDVPDD VNHLVSSLLL KEPEERPASA SEVAHTAAVI RSNAGTGPPT PSTGFQGMAQ
TAVVGAVTGP GSGSMTYRTG GQPTAVAGQE DASARLAGAP ERRRRVSVPV ILAAAAAAII
IAAAVVAGFL SNGRSEVGNM RDTVDPPAAS PSSSPEETEE PVESAPADVP MAPEGDTGWN
TQPQDPVGSP SPSPDEDAEE SDAPEDGEDD DSEGGQSPPP DPGTGETPEP PPNNGGGNNG
GDDGSGGNNG GGEEVGTT
|
|---|
| |