Gene Ndas_5243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5243 
Symbol 
ID9249140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand+ 
Start bp403135 
End bp403659 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content67% 
IMG OID 
ProductPeptidylprolyl isomerase 
Protein accessionYP_003683129 
Protein GI297564156 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0323546 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones8 
Fosmid unclonability p-value0.0050054 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTCCGACT CCACGGCTCA GCCCACCGCG CGGCTGAACA CCTCCAAGGG AACCATCGTC 
ATCAGGCTGT TCGAGAAGGA GGCGCCGGAG ACGGTCGCCA ACTTCATCGG TCTGGCCGAG 
GGCTCGAAGC AGTGGGTGGA CCCCACCACG GGCAAGCCCT CCAACAGCAG CCTCTACGAG 
GGCACGATCT TCCACCGCGT CATCGACGGT TTCATGATCC AGGGCGGCGA CCCGCTCGGC 
ACCGGCCGCG GCGGCCCCGG CTACAAGTTC AAGGACGAGA TCCACCCGAA CCTGCGCTTC 
GACCGTCCGT TCCTGCTGGC CATGGCCAAC GCGGGCCCCG GCACCAACGG CTCGCAGTTC 
TTCGTCACCG TGGACAAGCC GTACTGGCTC GACGGCCGCC ACACCATCTT CGGCGAGGTC 
GTCGAGGGGG ACGACGTGGT CACCGCGATC TCCCAGGTCG AGACCGACTC CCAGGACCGT 
CCCCGCGAGG ACGTGGTGAT CAACAGCGTC GAGATCACCC GATAG
 
Protein sequence
MSDSTAQPTA RLNTSKGTIV IRLFEKEAPE TVANFIGLAE GSKQWVDPTT GKPSNSSLYE 
GTIFHRVIDG FMIQGGDPLG TGRGGPGYKF KDEIHPNLRF DRPFLLAMAN AGPGTNGSQF 
FVTVDKPYWL DGRHTIFGEV VEGDDVVTAI SQVETDSQDR PREDVVINSV EITR