Gene Ndas_5240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5240 
Symbol 
ID9249137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand+ 
Start bp400535 
End bp400963 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content72% 
IMG OID 
Producttranscription factor WhiB 
Protein accessionYP_003683126 
Protein GI297564153 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.231068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones6 
Fosmid unclonability p-value0.000573048 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTGGAATG AGAAGATGGC GGCCCGTGCC AAATGCCGCG AGATCGACCC GGACGCGCTG 
TTCGTGCAGG GTGCTGCGCA GAACCGCGCC AAACTGATCT GCCGGGGCTG TCCGGTCCGG 
ACGCAATGCC TGGCGGAGGC GTTGGACAGC CGTATCGAGT TCGGTGTCTG GGGAGGCATG 
ACCGAACGCG AGCGCCGCGC CCTGCTGCGT CGGCGCAAGG ACGTCACCAA CTGGTACGAA 
CTGCTCACCA GCGCCGAGCG CCAGTACGAG CGGGAGCAGG CCGAGCAGGA GCCCCCGACC 
TCTCCGATCC CGGCCGCGGC TCCGGCCCTG GCCTCCTGCC CCGACCCGGA ACCGACGCCG 
GCTCCGGACC CGGCCAGGGT CGTCGCGCCG GTCCCGACCG GGATGCCCTC CGCCGTCGCC 
GCCCGGTGA
 
Protein sequence
MWNEKMAARA KCREIDPDAL FVQGAAQNRA KLICRGCPVR TQCLAEALDS RIEFGVWGGM 
TERERRALLR RRKDVTNWYE LLTSAERQYE REQAEQEPPT SPIPAAAPAL ASCPDPEPTP 
APDPARVVAP VPTGMPSAVA AR