Gene Ndas_5234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5234 
Symbol 
ID9249127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp386907 
End bp387836 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content74% 
IMG OID 
ProductInosine/uridine-preferring nucleoside hydrolase 
Protein accessionYP_003683120 
Protein GI297564147 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.604929 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000866911 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGTGTGT TCGTCGACTG CGACCCGGGG ATCGACGACG CCGTCGCGCT CGCCTACCTG 
GCCGCTCGGC CCGAGGTGGA GATCGTCGGC GTCGGGGCGG TCTTCGGCAA CAACAGCGTG
GACGTCACGG CCGACAACGC GCTGCGGCTG CTGGAGCTGT ACGGCCGCCC GGACGTCCCG
GTGGCGGTGG GCGCCGCGCG TCCGCTGGTG CAGCCGCCGA AGCTGGCCGC GCACGTGCAC
GGAGGCAACG GACTGGGGGA CGTGGAGCTG CCCGAGCCCG CGGGTCGGCC GGTGTCAGAG
ACGGCGGCCG GGCTGCTGGT GCGCCTGGTC CGGGAGAACC CGGGCGGGAT CGACGTGCTG
GCCGTGGGGC CGCTGACGAA CCTGGCGATC GCGCTGGCCC TGGAGCCGGA GCTGCCGAGG
CTGGTGCGGC GCCTGGTGGT GATGGGCGGT GCGGTGCGCG TGGCGGGCAA CGTGTCCTCA
CACGCCGAGG CCAACATCAG CAACGACCCC GAGGCGGCGG AGGCGGTGTT CGCGGCCGGG
TTCGACCTGG ACCTGGTGGC GCTGGACATC ACCATGAAGA CGGTGGCCAC CACCGAGTGG
CTGGCGGAGC TGGCGACGGT CGCGGGCGAG CGCGCCGAGC GCACGTCGGC GTTCCTGGAC
TTCTACGCCG ACTTCTACTC GGGGATCTTC GGGGTCCGCC AGTGCGCGAT GCACGACCCG
CTGGCCGCGG CGGTGCTGGT GGACCCGCAC CTGGTGACGG AGTCCTTCGA GGCCCCGGTG
CAGGTGGAGC TGACGGGAAC GCTGACGCGG GGGATGACCG TGGCGGACCT GCGCCCGCGC
CCGCGGGACG ACGAGCGCCG CCCCGCGCGG GTGGTCACGG GCGTGGCCGA GGCCGAGTTC
CTGGGGCGGA TGCTCGACTC GCTGCGCTGA
 
Protein sequence
MRVFVDCDPG IDDAVALAYL AARPEVEIVG VGAVFGNNSV DVTADNALRL LELYGRPDVP 
VAVGAARPLV QPPKLAAHVH GGNGLGDVEL PEPAGRPVSE TAAGLLVRLV RENPGGIDVL
AVGPLTNLAI ALALEPELPR LVRRLVVMGG AVRVAGNVSS HAEANISNDP EAAEAVFAAG
FDLDLVALDI TMKTVATTEW LAELATVAGE RAERTSAFLD FYADFYSGIF GVRQCAMHDP
LAAAVLVDPH LVTESFEAPV QVELTGTLTR GMTVADLRPR PRDDERRPAR VVTGVAEAEF
LGRMLDSLR